Strain Fitness in Variovorax sp. SCN45 around GFF790

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
82,253	+		GFF789	0.41	-0.2
82,253	+		GFF789	0.41	+1.5
82,253	+		GFF789	0.41	-0.1
82,253	+		GFF789	0.41	-0.2
82,253	+		GFF789	0.41	-2.8
82,253	+		GFF789	0.41	-0.7
82,253	+		GFF789	0.41	+1.7
82,254	-		GFF789	0.41	+2.4
82,254	-		GFF789	0.41	-1.9
82,254	-		GFF789	0.41	-1.6
82,254	-		GFF789	0.41	-2.5
82,254	-		GFF789	0.41	-0.2
82,254	-		GFF789	0.41	-1.5
82,355	+		GFF789	0.48	+0.4
82,355	+		GFF789	0.48	-1.2
82,355	+		GFF789	0.48	+2.7
82,355	+		GFF789	0.48	+1.1
82,355	+		GFF789	0.48	-2.2
82,356	-		GFF789	0.48	-0.4
82,356	-		GFF789	0.48	-3.4
82,356	-		GFF789	0.48	+0.8
82,374	-		GFF789	0.50	-0.1
82,545	-		GFF789	0.62	+1.4
82,545	-		GFF789	0.62	-1.7
82,545	-		GFF789	0.62	-1.2
82,545	-		GFF789	0.62	+0.7
83,136	+				-2.0
83,136	+				+2.3
83,136	+				+1.8
83,136	+				-1.0
83,136	+				+1.9
83,136	+				+0.8
83,136	+				+1.0
83,136	+				-1.2
83,137	-				+0.8
83,137	-				-1.9
83,137	-				-3.1
83,137	-				-1.2
83,137	-				+0.4
83,137	-				-1.5
83,137	-				+0.7
83,137	-				-2.3
83,174	-				+2.0
83,365	+		GFF790	0.17	-2.1
83,365	+		GFF790	0.17	-0.4
83,503	+		GFF790	0.38	-2.3
83,503	+		GFF790	0.38	-0.5
83,503	+		GFF790	0.38	-0.7
83,504	-		GFF790	0.38	-2.4
83,504	-		GFF790	0.38	-1.5
83,632	+		GFF790	0.57	-2.9
83,633	-		GFF790	0.57	-1.2
83,633	-		GFF790	0.57	-1.9
83,726	+		GFF790	0.71	-1.5
83,726	+		GFF790	0.71	+0.1
83,727	-		GFF790	0.71	-0.7
83,727	-		GFF790	0.71	-1.0
83,727	-		GFF790	0.71	-0.4
83,978	+				-1.3
83,979	-				+0.7
84,107	+		GFF791	0.33	-1.7
84,107	+		GFF791	0.33	+0.3
84,107	+		GFF791	0.33	-2.0
84,107	+		GFF791	0.33	-1.7
84,107	+		GFF791	0.33	-0.4
84,108	-		GFF791	0.33	-0.7
84,108	-		GFF791	0.33	+0.6
84,108	-		GFF791	0.33	+1.4
84,137	+		GFF791	0.39	+2.8
84,137	+		GFF791	0.39	-1.2
84,138	-		GFF791	0.39	-2.6
84,465	-				-1.7
84,496	+				-1.0
84,496	+				-1.0
84,496	+				+1.7
84,496	+				-1.9
84,497	-				-1.9
84,497	-				-0.1
84,497	-				-1.0
84,497	-				+0.6
84,497	-				-0.2
84,497	-				-2.0
84,502	+				+1.3
84,502	+				-0.1
84,502	+				-2.8
84,502	+				-1.3
84,503	-				-0.6
84,503	-				-1.0
84,503	-				-0.5
84,503	-				-0.2
84,846	-		GFF792	0.35	-1.4
84,846	-		GFF792	0.35	+0.3