Strain Fitness in Variovorax sp. SCN45 around GFF766

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
29,533	+		GFF764	0.82	+0.9
29,533	+		GFF764	0.82	+1.7
29,533	+		GFF764	0.82	-1.2
29,533	+		GFF764	0.82	-0.5
29,534	-		GFF764	0.82	-3.0
29,534	-		GFF764	0.82	-1.2
29,534	-		GFF764	0.82	-1.3
29,534	-		GFF764	0.82	-0.9
29,534	-		GFF764	0.82	-0.1
29,534	-		GFF764	0.82	+1.5
29,536	+		GFF764	0.82	-0.6
29,537	-		GFF764	0.82	-2.2
29,537	-		GFF764	0.82	+0.1
29,551	+		GFF764	0.83	-2.3
29,635	+		GFF764	0.88	+0.9
29,897	-				-1.4
29,949	-				-0.5
30,042	+				-0.2
30,061	+				-2.3
30,061	+				-1.0
30,061	+				+1.5
30,061	+				-2.2
30,061	+				-0.7
30,061	+				+2.7
30,062	-				+1.8
30,062	-				-2.4
30,062	-				+0.8
30,062	-				-0.7
30,062	-				-0.5
30,062	-				-0.5
30,062	-				+1.4
30,097	+		GFF765	0.20	+1.1
30,098	-		GFF765	0.21	-0.0
30,224	+		GFF765	0.68	-3.1
30,247	+		GFF765	0.76	+0.8
30,539	+				+0.1
30,572	+				+0.2
30,573	-				-0.7
30,625	-				+1.5
30,671	+				-0.7
30,671	+				-1.2
30,671	+				-2.3
30,672	-				+1.8
30,672	-				+1.1
30,738	+		GFF766	0.13	+0.3
30,738	+		GFF766	0.13	+0.9
30,764	+		GFF766	0.14	+0.8
30,765	-		GFF766	0.14	+1.5
30,765	-		GFF766	0.14	-0.1
30,765	-		GFF766	0.14	-0.3
30,765	-		GFF766	0.14	-1.7
30,770	+		GFF766	0.14	-2.5
30,770	+		GFF766	0.14	-1.2
30,879	-		GFF766	0.20	-1.5
30,950	+		GFF766	0.24	-3.5
31,031	+		GFF766	0.28	+1.2
31,032	-		GFF766	0.28	-0.3
31,122	-		GFF766	0.33	+1.3
31,122	-		GFF766	0.33	-3.6
31,166	+		GFF766	0.35	-2.8
31,166	+		GFF766	0.35	-1.6
31,166	+		GFF766	0.35	-1.2
31,167	-		GFF766	0.35	-3.2
31,167	-		GFF766	0.35	-3.0
31,167	-		GFF766	0.35	+1.5
31,277	+		GFF766	0.41	-1.7
31,278	-		GFF766	0.41	+0.7
31,278	-		GFF766	0.41	-1.0
31,278	-		GFF766	0.41	+1.1
31,278	-		GFF766	0.41	+0.3
31,338	-		GFF766	0.44	-0.2
31,397	+		GFF766	0.47	-2.5
31,398	-		GFF766	0.47	-0.0
31,398	-		GFF766	0.47	-2.2
31,398	-		GFF766	0.47	-1.7
31,442	+		GFF766	0.50	+0.9
31,442	+		GFF766	0.50	+5.2
31,443	-		GFF766	0.50	-0.1
31,443	-		GFF766	0.50	-1.5
31,443	-		GFF766	0.50	-0.9
31,547	+		GFF766	0.55	-0.4
31,682	+		GFF766	0.62	+1.7
31,683	-		GFF766	0.62	-2.5
31,683	-		GFF766	0.62	-2.4
31,683	-		GFF766	0.62	-1.4
31,683	-		GFF766	0.62	-2.0
31,712	+		GFF766	0.64	+2.0
31,712	+		GFF766	0.64	+0.5
31,712	+		GFF766	0.64	-0.8
31,712	+		GFF766	0.64	+0.1
31,713	-		GFF766	0.64	+0.8
31,713	-		GFF766	0.64	-1.7
31,713	-		GFF766	0.64	-0.6
31,745	+		GFF766	0.65	+2.6
31,745	+		GFF766	0.65	-0.7
31,745	+		GFF766	0.65	+1.3
31,745	+		GFF766	0.65	+1.1
31,745	+		GFF766	0.65	-2.7
31,746	-		GFF766	0.66	-0.3
31,746	-		GFF766	0.66	+0.3
31,746	-		GFF766	0.66	+2.8
31,875	-		GFF766	0.72	+1.4
31,875	-		GFF766	0.72	+1.0
32,031	-		GFF766	0.80	-0.7
32,198	+		GFF766	0.89	-1.2
32,198	+		GFF766	0.89	+1.3
32,198	+		GFF766	0.89	-1.2
32,198	+		GFF766	0.89	+0.5
32,198	+		GFF766	0.89	+2.8
32,198	+		GFF766	0.89	+1.6
32,722	+		GFF767	0.16	+0.8
32,722	+		GFF767	0.16	-2.1
32,722	+		GFF767	0.16	-2.4
32,723	-		GFF767	0.16	-1.1
32,728	+		GFF767	0.16	+0.7
32,728	+		GFF767	0.16	+0.5
32,728	+		GFF767	0.16	-1.1
32,729	-		GFF767	0.16	+0.2
32,729	-		GFF767	0.16	-1.3
32,729	-		GFF767	0.16	-2.2
33,077	-		GFF767	0.33	+0.6
33,077	-		GFF767	0.33	+0.2
33,184	+		GFF767	0.38	+0.7
33,184	+		GFF767	0.38	+1.3
33,185	-		GFF767	0.38	+1.6