Strain Fitness in Variovorax sp. SCN45 around GFF75

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
91,428	-		GFF74	0.34	-0.0
91,619	+		GFF74	0.55	+0.5
91,620	-		GFF74	0.55	-0.3
91,620	-		GFF74	0.55	-2.3
91,799	+		GFF74	0.74	-0.0
91,799	+		GFF74	0.74	+1.2
91,799	+		GFF74	0.74	-1.3
91,800	-		GFF74	0.74	-0.5
91,800	-		GFF74	0.74	-1.5
91,800	-		GFF74	0.74	+1.3
91,800	-		GFF74	0.74	-0.3
91,978	+				+0.4
91,978	+				-0.2
92,048	+				+0.1
92,064	+				-3.2
92,622	+		GFF75	0.47	-2.3
92,622	+		GFF75	0.47	-0.2
92,623	-		GFF75	0.47	+0.7
92,623	-		GFF75	0.47	-0.1
92,925	+		GFF75	0.76	-1.1
92,926	-		GFF75	0.76	-2.4
92,926	-		GFF75	0.76	-1.0
92,926	-		GFF75	0.76	-0.3
92,926	-		GFF75	0.76	-1.9
92,926	-		GFF75	0.76	-1.2
92,970	+		GFF75	0.81	-1.3
92,970	+		GFF75	0.81	-0.4
92,971	-		GFF75	0.81	+0.3
93,024	+		GFF75	0.86	+0.1
93,024	+		GFF75	0.86	-2.3
93,024	+		GFF75	0.86	-2.8
93,025	-		GFF75	0.86	+2.2
93,025	-		GFF75	0.86	+0.1
93,909	-		GFF76	0.70	-1.2
93,909	-		GFF76	0.70	-2.3
93,909	-		GFF76	0.70	+0.9
93,911	+		GFF76	0.70	-0.1
93,911	+		GFF76	0.70	+1.9
93,911	+		GFF76	0.70	+1.2
93,911	+		GFF76	0.70	-1.5
93,912	-		GFF76	0.70	-0.8
93,912	-		GFF76	0.70	-0.3
93,912	-		GFF76	0.70	+0.4
94,080	-		GFF76	0.86	+0.3
94,080	-		GFF76	0.86	+0.1
94,109	+		GFF76	0.89	+0.4
94,121	+		GFF76	0.90	-0.1
94,121	+		GFF76	0.90	-0.7
94,121	+		GFF76	0.90	-0.6
94,121	+		GFF76	0.90	-1.0
94,121	+		GFF76	0.90	-0.9
94,122	-				-2.7
94,122	-				+2.2
94,122	-				+0.2
94,122	-				+0.7
94,147	-				+1.8