Strain Fitness in Variovorax sp. SCN45 around GFF7384

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
999	+				-1.8
999	+				-0.4
1,119	-		GFF7383	0.21	+3.4
1,119	-		GFF7383	0.21	+0.4
1,164	-		GFF7383	0.25	+1.5
1,205	+		GFF7383	0.30	-0.8
1,205	+		GFF7383	0.30	-1.1
1,348	+		GFF7383	0.44	+1.0
1,390	+		GFF7383	0.48	-0.8
1,391	-		GFF7383	0.48	+0.7
1,405	+		GFF7383	0.50	-0.1
1,406	-		GFF7383	0.50	-0.8
1,458	+		GFF7383	0.55	-2.0
1,459	-		GFF7383	0.55	-2.9
1,459	-		GFF7383	0.55	+0.4
1,459	-		GFF7383	0.55	+0.5
1,511	+		GFF7383	0.60	-0.0
1,512	-		GFF7383	0.61	+0.4
1,742	+		GFF7383	0.84	-1.8
1,742	+		GFF7383	0.84	-1.9
1,742	+		GFF7383	0.84	-1.6
1,743	-		GFF7383	0.84	+0.3
1,765	-		GFF7383	0.86	-0.1
2,175	+		GFF7384	0.24	-1.5
2,223	+		GFF7384	0.28	-0.7
2,223	+		GFF7384	0.28	-1.7
2,223	+		GFF7384	0.28	-1.3
2,937	+				-0.0
3,090	+				-3.3
3,091	-				-3.3
3,136	+				+2.0
3,136	+				+0.0
3,136	+				+1.8
3,180	+				-2.2
3,180	+				-0.8
3,181	-				-0.9
3,181	-				-0.3
3,181	-				-0.5
3,249	+		GFF7385	0.11	+0.3
3,250	-		GFF7385	0.11	-1.0
3,315	+		GFF7385	0.16	-1.7
3,316	-		GFF7385	0.16	-0.4
3,316	-		GFF7385	0.16	-0.8
3,437	-		GFF7385	0.25	-0.6
3,498	+		GFF7385	0.30	-2.7
3,498	+		GFF7385	0.30	-0.4
3,499	-		GFF7385	0.30	-1.6
3,538	-		GFF7385	0.33	-0.0
3,610	-		GFF7385	0.38	-0.8
3,879	-		GFF7385	0.57	+1.6
3,885	-		GFF7385	0.58	+2.3
3,891	+		GFF7385	0.58	+0.2
3,892	-		GFF7385	0.58	+0.8