Strain Fitness in Variovorax sp. SCN45 around GFF7282

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
52	+		GFF7282	0.40	-2.2
52	+		GFF7282	0.40	-3.9
52	+		GFF7282	0.40	+0.9
52	+		GFF7282	0.40	-0.1
52	+		GFF7282	0.40	+0.5
88	-		GFF7282	0.69	-2.9
105	+		GFF7282	0.83	+0.5
106	-		GFF7282	0.83	-1.4
124	+				+1.1
124	+				-1.6
124	+				+0.4
124	+				-0.8
124	+				-2.0
125	-				+0.2
125	-				-1.7
125	-				-2.2
254	-				+0.7
276	+				-3.2
276	+				-1.8
277	-				+0.8
334	+				-1.7
334	+				+1.6
334	+				+0.0
335	-				-2.8
335	-				-1.1
352	+				-0.7
352	+				+4.1
353	-				+0.6
353	-				+0.3
353	-				-0.9
419	-		GFF7283	0.11	+1.2
419	-		GFF7283	0.11	+0.1
547	+		GFF7283	0.19	-0.9
547	+		GFF7283	0.19	+0.5
548	-		GFF7283	0.19	-1.2
721	+		GFF7283	0.29	-1.9
721	+		GFF7283	0.29	-3.5
721	+		GFF7283	0.29	+2.5
721	+		GFF7283	0.29	-1.2
721	+		GFF7283	0.29	+0.8
721	+		GFF7283	0.29	+3.1
721	+		GFF7283	0.29	+0.9
722	-		GFF7283	0.30	-0.6
722	-		GFF7283	0.30	-3.0
722	-		GFF7283	0.30	-2.5
722	-		GFF7283	0.30	-0.4
862	+		GFF7283	0.38	-2.6
862	+		GFF7283	0.38	+2.5
862	+		GFF7283	0.38	-2.0
862	+		GFF7283	0.38	-0.3
862	+		GFF7283	0.38	+0.3
862	+		GFF7283	0.38	-0.7
862	+		GFF7283	0.38	-0.5
863	-		GFF7283	0.38	+1.5
863	-		GFF7283	0.38	-0.1
1,015	+		GFF7283	0.47	+0.9
1,015	+		GFF7283	0.47	-1.8
1,015	+		GFF7283	0.47	+0.6
1,016	-		GFF7283	0.47	-1.7
1,016	-		GFF7283	0.47	-0.5