Strain Fitness in Variovorax sp. SCN45 around GFF6982

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
152	-				+0.8
171	-				-1.8
171	-				-0.8
209	-				-2.9
276	+				+1.6
376	-				-0.9
621	+		GFF6981	0.42	+0.6
674	+		GFF6981	0.51	-1.6
781	-		GFF6981	0.69	-0.4
909	-				-1.1
930	+				-2.7
1,040	+		GFF6982	0.16	+1.7
1,040	+		GFF6982	0.16	+0.2
1,257	-		GFF6982	0.61	-0.0
1,257	-		GFF6982	0.61	+1.2
1,509	+				-2.2
1,510	-				+0.6
1,510	-				-0.4
1,724	-		GFF6983	0.20	-0.1
1,724	-		GFF6983	0.20	-0.6
1,724	-		GFF6983	0.20	-3.2
2,386	+		GFF6983	0.72	-2.9
2,386	+		GFF6983	0.72	-1.1