Strain Fitness in Variovorax sp. SCN45 around GFF67

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
82,876	+		GFF66	0.33	+1.5
83,122	+		GFF66	0.53	+0.2
83,122	+		GFF66	0.53	-1.0
83,191	+		GFF66	0.59	+0.7
83,467	+		GFF66	0.81	+1.3
83,467	+		GFF66	0.81	+1.4
83,467	+		GFF66	0.81	+1.4
83,467	+		GFF66	0.81	-3.3
83,468	-		GFF66	0.81	+3.2
83,468	-		GFF66	0.81	+0.6
83,468	-		GFF66	0.81	+2.7
83,468	-		GFF66	0.81	-0.0
83,564	-		GFF66	0.88	-2.0
83,602	+				+0.1
83,602	+				+0.1
83,602	+				-1.8
83,603	-				-2.3
83,721	+				-1.3
83,721	+				-0.2
83,721	+				-1.5
83,722	-				+2.5
83,763	+				-1.4
83,764	-				+1.0
83,854	-		GFF67	0.12	+0.7
83,877	+		GFF67	0.14	-0.7
83,878	-		GFF67	0.14	+1.2
84,126	+		GFF67	0.34	-1.0
84,126	+		GFF67	0.34	+0.2
84,127	-		GFF67	0.34	+0.6
84,408	+		GFF67	0.57	+0.7
84,408	+		GFF67	0.57	+0.5
84,409	-		GFF67	0.57	-1.0
84,409	-		GFF67	0.57	-0.3
84,861	+				+1.7
85,052	-				-1.3
85,052	-				+1.7
85,052	-				+0.3
85,265	-		GFF68	0.26	+0.7
85,267	+		GFF68	0.27	-3.4
85,360	+		GFF68	0.35	-0.3
85,360	+		GFF68	0.35	-0.3
85,361	-		GFF68	0.35	+2.0
85,420	+		GFF68	0.40	-2.9
85,420	+		GFF68	0.40	+1.0
85,505	-		GFF68	0.48	-2.3
85,582	+		GFF68	0.55	-1.3
85,582	+		GFF68	0.55	+1.5
85,583	-		GFF68	0.55	-0.9
85,583	-		GFF68	0.55	+0.8
85,616	-		GFF68	0.58	+1.3
85,639	+		GFF68	0.60	-0.7
85,672	+		GFF68	0.63	+0.7
85,672	+		GFF68	0.63	+0.9
85,673	-		GFF68	0.63	+0.2
85,673	-		GFF68	0.63	-0.4