Strain Fitness in Variovorax sp. SCN45 around GFF5738

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
112,219	-		GFF5737	0.34	+0.3
112,219	-		GFF5737	0.34	-3.4
113,403	+		GFF5738	0.55	-0.7
113,442	+		GFF5738	0.60	+1.1
113,443	-		GFF5738	0.60	-0.6
113,798	+		GFF5739	0.16	-1.5
113,799	-		GFF5739	0.16	-2.1
114,038	-				-1.2
114,041	+				+0.5
114,041	+				-0.1
114,041	+				-2.7
114,042	-				-1.3
114,043	+				+0.1
114,043	+				+2.8
114,043	+				+1.2
114,043	+				+1.5
114,043	+				+2.4
114,043	+				+2.2
114,044	-				+0.9
114,044	-				-2.2
114,044	-				+2.1
114,044	-				-0.2
114,044	-				-0.2
114,437	-		GFF5740	0.53	+0.8
114,448	+		GFF5740	0.54	+0.1