Strain Fitness in Variovorax sp. SCN45 around GFF5243

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
107,105	+		GFF5241	0.85	+1.1
107,105	+		GFF5241	0.85	+0.8
107,105	+		GFF5241	0.85	+0.1
107,106	-		GFF5241	0.86	-2.2
107,210	+				-2.2
107,210	+				+1.5
107,211	-				-0.9
107,211	-				-0.9
107,680	+		GFF5243	0.16	+0.8
107,680	+		GFF5243	0.16	+1.2
107,681	-		GFF5243	0.16	-0.2
108,182	+		GFF5244	0.21	+0.6
108,182	+		GFF5244	0.21	-1.3
108,182	+		GFF5244	0.21	-3.5
108,182	+		GFF5244	0.21	+0.8
108,182	+		GFF5244	0.21	-1.5
108,182	+		GFF5244	0.21	-0.5
108,182	+		GFF5244	0.21	-0.0
108,183	-		GFF5244	0.21	-0.3
108,183	-		GFF5244	0.21	-1.0
108,183	-		GFF5244	0.21	-0.7
108,183	-		GFF5244	0.21	+1.9
108,183	-		GFF5244	0.21	+0.7
108,183	-		GFF5244	0.21	-2.0
108,183	-		GFF5244	0.21	+1.1
108,188	+		GFF5244	0.22	+0.5
108,189	-		GFF5244	0.22	+0.5
108,189	-		GFF5244	0.22	+1.1
108,227	+		GFF5244	0.30	+1.1
108,228	-		GFF5244	0.30	-0.2
108,326	+		GFF5244	0.50	-1.4
108,490	-		GFF5244	0.84	-2.4
108,513	+		GFF5244	0.88	+0.4
108,514	-		GFF5244	0.88	-0.9
108,519	+		GFF5244	0.89	-1.1
108,519	+		GFF5244	0.89	-2.7
108,519	+		GFF5244	0.89	-2.4
108,519	+		GFF5244	0.89	+0.5
108,519	+		GFF5244	0.89	-3.1
108,519	+		GFF5244	0.89	-0.5
108,519	+		GFF5244	0.89	+2.7
108,520	-		GFF5244	0.90	-2.4
108,520	-		GFF5244	0.90	+2.1
108,520	-		GFF5244	0.90	-1.4
108,520	-		GFF5244	0.90	-0.4
108,520	-		GFF5244	0.90	+0.3
108,520	-		GFF5244	0.90	-2.8
108,581	+				-1.6
108,581	+				+0.4
108,923	+		GFF5245	0.45	-0.0
108,923	+		GFF5245	0.45	+0.1
108,923	+		GFF5245	0.45	-1.8
108,923	+		GFF5245	0.45	+0.1
108,923	+		GFF5245	0.45	-0.1
108,923	+		GFF5245	0.45	+0.0
108,923	+		GFF5245	0.45	+1.1
108,923	+		GFF5245	0.45	+2.4
108,923	+		GFF5245	0.45	+0.3
108,923	+		GFF5245	0.45	-0.8
108,923	+		GFF5245	0.45	+0.7
108,923	+		GFF5245	0.45	-1.8
108,923	+		GFF5245	0.45	-3.0
108,923	+		GFF5245	0.45	-2.1
108,923	+		GFF5245	0.45	+0.5
108,923	+		GFF5245	0.45	+2.5
108,923	+		GFF5245	0.45	-0.4
108,923	+		GFF5245	0.45	+1.0
108,923	+		GFF5245	0.45	-2.1
108,923	+		GFF5245	0.45	+0.8
108,923	+		GFF5245	0.45	-0.5
108,924	-		GFF5245	0.45	-1.5
108,924	-		GFF5245	0.45	+0.3
108,924	-		GFF5245	0.45	-0.5
108,924	-		GFF5245	0.45	-0.2
108,924	-		GFF5245	0.45	-0.7
108,924	-		GFF5245	0.45	-0.0
108,924	-		GFF5245	0.45	-2.9
108,924	-		GFF5245	0.45	-1.3
108,924	-		GFF5245	0.45	+0.3
108,924	-		GFF5245	0.45	-3.2
108,924	-		GFF5245	0.45	-1.8
108,924	-		GFF5245	0.45	-0.3
108,924	-		GFF5245	0.45	+1.1
108,924	-		GFF5245	0.45	-0.4
108,924	-		GFF5245	0.45	-0.5
108,924	-		GFF5245	0.45	-1.7
108,924	-		GFF5245	0.45	-0.5
108,924	-		GFF5245	0.45	-1.4