Strain Fitness in Variovorax sp. SCN45 around GFF4579

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
217,373	-				+0.9
217,608	-		GFF4578	0.27	-2.1
218,119	+		GFF4578	0.82	-0.2
218,120	+		GFF4578	0.82	+0.2
218,120	+		GFF4578	0.82	+2.2
218,120	+		GFF4578	0.82	-0.1
218,120	+		GFF4578	0.82	-2.9
218,288	+				+1.6
218,288	+				-0.4
218,288	+				+1.0
218,558	-		GFF4579	0.26	+0.4
218,558	-		GFF4579	0.26	+1.3
219,198	+				+1.5
219,198	+				+0.2
219,199	-				-2.4
219,463	+				-1.1
219,484	-				-1.1
219,621	+				-1.2
219,688	+				+0.1
219,720	-				-0.0
219,722	-				-0.3
219,722	-				-1.3
219,722	-				+0.7
220,096	+				-2.8
220,096	+				+2.6
220,165	+				-1.3