Strain Fitness in Variovorax sp. SCN45 around GFF2750

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
181,725	-				+0.4
182,210	+				+0.9
182,211	-				-1.0
182,211	-				-0.1
182,211	-				-0.6
182,211	-				-2.1
182,211	-				-1.5
182,633	+		GFF2749	0.89	+0.3
182,633	+		GFF2749	0.89	-2.1
182,633	+		GFF2749	0.89	-0.8
182,633	+		GFF2749	0.89	-0.7
182,633	+		GFF2749	0.89	+0.4
182,633	+		GFF2749	0.89	+0.9
182,634	-		GFF2749	0.89	+0.7
182,634	-		GFF2749	0.89	-3.9
182,634	-		GFF2749	0.89	-0.1
182,634	-		GFF2749	0.89	-0.8
182,634	-		GFF2749	0.89	-0.3
182,634	-		GFF2749	0.89	-1.7
182,634	-		GFF2749	0.89	+0.1
182,634	-		GFF2749	0.89	+0.2
182,634	-		GFF2749	0.89	+0.2
182,634	-		GFF2749	0.89	-1.6
182,634	-		GFF2749	0.89	+1.2
182,702	+				+0.7
182,702	+				+0.4
182,703	-				-2.1
183,724	+		GFF2750	0.85	-0.4
183,725	-		GFF2750	0.85	+0.3
183,851	-				-0.9
183,851	-				-0.4
183,851	-				-1.1
183,915	+				+0.1
183,915	+				-0.1
183,985	+				+2.8
183,985	+				-0.2
183,985	+				-1.7
183,985	+				-0.7
183,985	+				-0.6
183,985	+				-0.8
183,985	+				-3.3
183,985	+				-0.7
183,985	+				-0.7
183,986	-				+0.2
183,986	-				+0.1
183,986	-				-0.7
183,986	-				+1.0
183,986	-				-0.5
183,986	-				-0.2
183,986	-				+0.1
183,986	-				-0.8
183,986	-				-2.6
183,986	-				+0.6
183,986	-				+0.5
183,986	-				+0.7
183,986	-				-1.2
183,986	-				+0.8
183,986	-				-0.2