Strain Fitness in Variovorax sp. SCN45 around GFF2668

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
90,330	+		GFF2666	0.69	+0.3
90,330	+		GFF2666	0.69	+0.6
90,330	+		GFF2666	0.69	-1.1
90,373	-		GFF2666	0.73	+0.1
90,373	-		GFF2666	0.73	-0.0
90,555	+		GFF2666	0.89	+0.1
90,555	+		GFF2666	0.89	-2.3
90,555	+		GFF2666	0.89	-1.6
90,555	+		GFF2666	0.89	-1.5
90,556	-		GFF2666	0.90	+0.5
90,556	-		GFF2666	0.90	-0.3
90,579	+				+0.6
90,609	+				+0.3
90,609	+				-0.4
90,610	-				-1.1
90,610	-				-3.1
90,610	-				-2.0
90,610	-				-0.2
90,774	-		GFF2667	0.16	+1.5
90,794	+		GFF2667	0.19	+1.8
90,905	+		GFF2667	0.37	-0.5
91,118	+		GFF2667	0.71	-1.2
91,119	-		GFF2667	0.72	+0.0
91,220	+		GFF2667	0.88	+0.3
91,221	-		GFF2667	0.88	+1.0
91,221	-		GFF2667	0.88	+0.7
91,665	+		GFF2668	0.74	+0.3
91,665	+		GFF2668	0.74	+1.5
91,666	-		GFF2668	0.74	-0.0
91,666	-		GFF2668	0.74	+1.3
91,843	+				-1.5
91,843	+				-0.3
91,919	+		GFF2669	0.12	-0.7
92,173	+		GFF2669	0.36	-2.7
92,173	+		GFF2669	0.36	+0.2
92,173	+		GFF2669	0.36	+0.7
92,173	+		GFF2669	0.36	+1.1
92,174	-		GFF2669	0.36	-1.7