Strain Fitness in Variovorax sp. SCN45 around GFF2659

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
80,446	-		GFF2658	0.50	-1.8
80,475	+		GFF2658	0.52	-3.1
80,475	+		GFF2658	0.52	+0.5
80,475	+		GFF2658	0.52	-0.5
80,475	+		GFF2658	0.52	+0.1
80,476	-		GFF2658	0.52	-1.8
80,476	-		GFF2658	0.52	-2.3
80,476	-		GFF2658	0.52	+0.8
80,476	-		GFF2658	0.52	-1.3
80,509	-		GFF2658	0.54	+0.3
80,745	+		GFF2658	0.67	-0.7
80,745	+		GFF2658	0.67	-1.5
80,746	-		GFF2658	0.67	-1.0
80,746	-		GFF2658	0.67	-0.2
80,746	-		GFF2658	0.67	-2.4
80,778	+		GFF2658	0.69	-1.2
80,778	+		GFF2658	0.69	-0.7
80,778	+		GFF2658	0.69	-3.1
80,778	+		GFF2658	0.69	+1.7
80,778	+		GFF2658	0.69	-2.5
80,778	+		GFF2658	0.69	+1.9
80,778	+		GFF2658	0.69	-1.8
80,778	+		GFF2658	0.69	-0.8
80,778	+		GFF2658	0.69	-1.2
80,778	+		GFF2658	0.69	-4.8
80,778	+		GFF2658	0.69	-0.7
80,779	-		GFF2658	0.69	-1.4
80,779	-		GFF2658	0.69	+1.1
80,779	-		GFF2658	0.69	-2.9
80,779	-		GFF2658	0.69	-3.7
80,779	-		GFF2658	0.69	-2.5
81,087	+		GFF2658	0.86	-0.7
81,087	+		GFF2658	0.86	+1.0
81,088	-		GFF2658	0.86	-2.0
81,088	-		GFF2658	0.86	-3.8
81,088	-		GFF2658	0.86	-2.4
81,088	-		GFF2658	0.86	-1.1
81,330	+				-1.0
81,330	+				+1.3
81,331	-				-0.7
81,331	-				-2.2
81,352	+				+0.1
81,352	+				-1.1
81,352	+				-0.7
81,353	-				-1.9
81,638	+		GFF2659	0.24	-1.9
81,638	+		GFF2659	0.24	-1.4
82,094	+		GFF2659	0.73	-2.0
82,094	+		GFF2659	0.73	-0.1
82,094	+		GFF2659	0.73	-1.7
83,151	+				-0.9
83,152	-				-2.7
83,152	-				+0.6
83,152	-				-0.4
83,152	-				-1.3
83,234	+				-0.5
83,234	+				-1.5
83,234	+				-2.4
83,236	+				+0.3
83,236	+				+0.5
83,236	+				-3.2
83,237	-				-1.1
83,237	-				-1.5
83,237	-				+1.8
83,237	-				-0.7
83,310	+				+0.8
83,310	+				+1.8
83,310	+				-1.5
83,311	-				+0.4
83,311	-				-2.8
83,311	-				+0.9