Strain Fitness in Variovorax sp. SCN45 around GFF157

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
184,499	+		GFF155	0.82	+1.7
184,500	-		GFF155	0.82	-1.3
184,500	-		GFF155	0.82	-0.8
184,657	+				-0.7
184,657	+				+0.8
184,657	+				+1.7
184,657	+				-2.3
184,657	+				-1.1
184,658	-				-1.0
184,658	-				-3.2
184,658	-				-1.5
184,658	-				-1.7
184,658	-				+0.1
184,907	+		GFF156	0.15	-1.8
184,908	-		GFF156	0.15	+0.8
184,908	-		GFF156	0.15	+0.4
185,083	+		GFF156	0.40	-0.9
185,083	+		GFF156	0.40	+0.8
185,084	-		GFF156	0.41	-1.3
185,084	-		GFF156	0.41	-0.0
185,746	-		GFF157	0.41	+1.7
185,958	+		GFF157	0.76	-1.9
185,958	+		GFF157	0.76	-1.5
185,959	-		GFF157	0.77	+0.5
185,971	-		GFF157	0.79	+0.7
185,971	-		GFF157	0.79	+0.7
186,021	+		GFF157	0.87	+2.7
186,022	-		GFF157	0.87	-2.2
186,042	+				+1.3
186,043	-				-1.9
186,043	-				+1.8
186,063	+				-0.7
186,063	+				+1.2
186,063	+				+0.3
186,063	+				-0.4
186,064	-				-0.2
186,064	-				-0.3
186,064	-				-2.5
186,078	+				-2.0
186,078	+				+1.2
186,116	+				-1.3
186,116	+				+0.7
186,117	-				-0.3
186,117	-				-0.3
186,117	-				-1.2
186,117	-				+0.4
186,847	+				+0.1
186,848	-				-0.5
186,848	-				+1.1