Strain Fitness in Variovorax sp. SCN45 around GFF1412

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
432	+				-1.6
432	+				+2.8
433	-				-0.6
739	-		GFF1412	0.20	+1.0
795	+		GFF1412	0.23	+0.6
976	+		GFF1412	0.31	-0.2
977	-		GFF1412	0.31	-2.8
1,144	+		GFF1412	0.38	+0.6
1,145	-		GFF1412	0.38	-0.8
1,860	-		GFF1412	0.71	-1.7
1,870	+		GFF1412	0.71	+1.4
1,991	-		GFF1412	0.77	+1.4
2,366	+				-1.0
2,650	+				-1.8
2,651	-				+0.2
2,651	-				-0.7
2,654	+				+1.7
2,655	-				+2.6
2,655	-				+0.1
2,668	+				-0.8
2,669	-				+2.2
2,669	-				-0.6
2,877	-		GFF1413	0.22	+0.3
2,993	+		GFF1413	0.28	+0.3
3,134	+		GFF1413	0.37	-0.9
3,273	-		GFF1413	0.45	-0.1