Strain Fitness in Variovorax sp. SCN45 around GFF787

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
79,460	+				-0.4
79,460	+				-0.4
79,481	+				-0.8
79,481	+				-2.3
79,481	+				-1.6
79,481	+				-0.8
79,481	+				-0.3
79,482	-				-2.4
79,482	-				-2.0
79,482	-				-3.1
79,482	-				-1.1
79,482	-				+1.2
79,482	-				-0.1
79,482	-				+1.4
79,638	-				+0.6
79,760	+				-0.7
79,760	+				-0.0
79,761	-				+0.2
79,781	+				-2.2
79,781	+				-0.7
79,782	-				+0.2
80,378	+				+1.4
80,378	+				+1.4
80,378	+				+0.1
80,378	+				-0.4
80,378	+				-1.6
80,378	+				-0.9
80,378	+				+1.2
80,378	+				-2.4
80,378	+				-0.9
80,379	-				-3.7
80,379	-				-0.9
80,379	-				-0.3
80,379	-				-1.1
80,728	+		GFF787	0.37	-3.3
80,728	+		GFF787	0.37	-0.5
80,729	-		GFF787	0.37	-1.4
80,729	-		GFF787	0.37	-0.3
80,797	+		GFF787	0.47	-1.0
80,797	+		GFF787	0.47	-1.8
80,798	-		GFF787	0.47	-1.9
80,798	-		GFF787	0.47	-1.3
80,798	-		GFF787	0.47	-2.1
81,195	+				-0.4
81,222	+				-1.4
81,231	+				-1.2
81,231	+				-1.6
81,231	+				-1.9
81,361	+		GFF788	0.32	+0.8
81,361	+		GFF788	0.32	-1.4
81,362	-		GFF788	0.32	-1.5
81,419	+		GFF788	0.45	+0.4
81,810	-				-2.8
82,185	-		GFF789	0.36	-1.5