Strain Fitness in Variovorax sp. SCN45 around GFF7354

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
2,016	-		GFF7352	0.66	+0.2
2,203	+				-0.2
2,362	-		GFF7353	0.23	-1.5
2,395	+		GFF7353	0.28	-1.1
2,437	+		GFF7353	0.33	-0.6
2,437	+		GFF7353	0.33	+2.7
2,437	+		GFF7353	0.33	-1.0
2,437	+		GFF7353	0.33	+2.5
2,437	+		GFF7353	0.33	-2.5
2,438	-		GFF7353	0.33	-0.8
2,438	-		GFF7353	0.33	-2.3
2,611	+		GFF7353	0.56	+0.1
2,612	-		GFF7353	0.56	+0.1
2,632	+		GFF7353	0.59	-0.4
2,777	-		GFF7353	0.78	+1.4
2,777	-		GFF7353	0.78	-0.1
2,915	-				-1.5
2,976	+		GFF7354	0.11	-0.6
2,976	+		GFF7354	0.11	+0.8
2,976	+		GFF7354	0.11	-1.5
2,994	+		GFF7354	0.17	-0.2
2,994	+		GFF7354	0.17	+0.5
3,111	+		GFF7354	0.56	-0.6
3,111	+		GFF7354	0.56	+0.5
3,226	+				-2.1
3,226	+				-1.3
3,227	-				-0.7
3,393	-		GFF7355	0.14	-2.3
3,493	-		GFF7355	0.24	-1.1
3,765	+		GFF7355	0.52	-3.4
3,765	+		GFF7355	0.52	-2.2
3,774	+		GFF7355	0.53	-0.7
3,774	+		GFF7355	0.53	-2.9
3,868	-		GFF7355	0.62	+1.0
3,885	+		GFF7355	0.64	-2.3
3,885	+		GFF7355	0.64	-1.2
3,957	+		GFF7355	0.71	-0.6
3,957	+		GFF7355	0.71	-0.8
3,957	+		GFF7355	0.71	-1.2
3,957	+		GFF7355	0.71	-1.6
3,958	-		GFF7355	0.71	-1.8
3,961	+		GFF7355	0.71	+0.4
3,961	+		GFF7355	0.71	-0.1
3,961	+		GFF7355	0.71	+0.1
3,961	+		GFF7355	0.71	-1.5
3,961	+		GFF7355	0.71	+0.0
3,962	-		GFF7355	0.72	-1.3
3,963	+		GFF7355	0.72	-2.3
3,963	+		GFF7355	0.72	+1.5
3,963	+		GFF7355	0.72	-0.6
3,963	+		GFF7355	0.72	+2.0
3,963	+		GFF7355	0.72	-1.7
3,964	-		GFF7355	0.72	-1.7
3,964	-		GFF7355	0.72	-0.7
3,964	-		GFF7355	0.72	-3.3
4,056	+		GFF7355	0.81	-0.8
4,056	+		GFF7355	0.81	-1.3
4,056	+		GFF7355	0.81	-1.1
4,056	+		GFF7355	0.81	-1.7
4,057	-		GFF7355	0.81	+0.5
4,057	-		GFF7355	0.81	+0.5