Strain Fitness in Variovorax sp. SCN45 around GFF7282

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
52	+		GFF7282	0.40	-3.7
52	+		GFF7282	0.40	-3.8
52	+		GFF7282	0.40	+1.0
52	+		GFF7282	0.40	+0.0
52	+		GFF7282	0.40	+0.6
88	-		GFF7282	0.69	-2.8
105	+		GFF7282	0.83	+0.2
106	-		GFF7282	0.83	-1.3
124	+				+0.9
124	+				-0.5
124	+				-0.8
124	+				+0.3
124	+				+0.1
125	-				-1.0
125	-				-1.8
125	-				+2.7
254	-				-0.2
276	+				-3.1
276	+				-1.6
277	-				-1.2
334	+				-0.6
334	+				-0.6
334	+				+0.7
335	-				-1.1
335	-				-3.0
352	+				+1.8
352	+				+1.6
353	-				+0.2
353	-				-0.6
353	-				-2.1
419	-		GFF7283	0.11	-1.9
419	-		GFF7283	0.11	+1.9
547	+		GFF7283	0.19	-0.4
547	+		GFF7283	0.19	+0.4
548	-		GFF7283	0.19	+1.0
721	+		GFF7283	0.29	+0.2
721	+		GFF7283	0.29	+0.8
721	+		GFF7283	0.29	+2.6
721	+		GFF7283	0.29	-1.1
721	+		GFF7283	0.29	-1.1
721	+		GFF7283	0.29	+0.6
721	+		GFF7283	0.29	+1.0
722	-		GFF7283	0.30	+0.7
722	-		GFF7283	0.30	+0.4
722	-		GFF7283	0.30	+0.8
722	-		GFF7283	0.30	-2.6
862	+		GFF7283	0.38	+1.4
862	+		GFF7283	0.38	-0.2
862	+		GFF7283	0.38	-1.9
862	+		GFF7283	0.38	-0.6
862	+		GFF7283	0.38	-0.2
862	+		GFF7283	0.38	+0.4
862	+		GFF7283	0.38	-0.4
863	-		GFF7283	0.38	+0.4
863	-		GFF7283	0.38	-2.6
1,015	+		GFF7283	0.47	+0.1
1,015	+		GFF7283	0.47	+0.8
1,015	+		GFF7283	0.47	-0.9
1,016	-		GFF7283	0.47	+2.6
1,016	-		GFF7283	0.47	-0.4