Strain Fitness in Variovorax sp. SCN45 around GFF7273

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
21,703	+		GFF7272	0.59	+1.2
21,704	-		GFF7272	0.59	+0.7
21,818	-		GFF7272	0.67	+1.6
21,818	-		GFF7272	0.67	+0.2
22,087	+		GFF7272	0.87	+1.3
22,087	+		GFF7272	0.87	+1.3
22,088	-		GFF7272	0.87	+1.8
22,250	+				+0.9
22,250	+				+2.8
22,251	-				+0.5
22,449	-				+0.8
22,659	-				-0.5
22,939	+		GFF7273	0.37	+1.0
22,940	-		GFF7273	0.37	-0.9
23,080	+		GFF7273	0.53	-1.4
23,081	-		GFF7273	0.53	+1.1
23,081	-		GFF7273	0.53	-0.0
23,081	-		GFF7273	0.53	-0.8
23,266	+		GFF7273	0.75	+0.5
23,285	-		GFF7273	0.77	-2.8
23,296	+		GFF7273	0.78	+0.1
23,457	+				-0.1
23,873	-		GFF7274	0.36	+0.7
24,223	-		GFF7274	0.68	+2.4
24,410	-		GFF7274	0.85	-1.7
24,436	+		GFF7274	0.87	+1.5
24,437	-		GFF7274	0.87	-0.5
24,438	+		GFF7274	0.87	-0.9
24,438	+		GFF7274	0.87	+0.2
24,439	-		GFF7274	0.88	-2.4