Strain Fitness in Variovorax sp. SCN45 around GFF7175

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
38,193	+		GFF7174	0.49	+1.0
38,334	+		GFF7174	0.76	+1.4
38,334	+		GFF7174	0.76	-1.0
38,335	-		GFF7174	0.76	+2.4
38,392	-		GFF7174	0.86	+0.7
38,427	+				+0.3
38,428	-				+1.6
38,443	+				-1.2
38,444	-				-2.4
38,511	+				+0.4
38,511	+				+0.7
38,511	+				+1.1
38,511	+				-0.7
38,511	+				+1.0
38,511	+				-0.6
39,387	+		GFF7175	0.88	+1.6
39,523	+				+1.0
39,524	+				+0.6
39,524	+				+2.6
39,525	-				-1.7
39,525	-				-2.5
39,525	-				+1.3
39,525	-				-0.5
39,525	-				+0.3
39,525	-				-0.4
39,525	-				-1.5
39,689	-				+0.3