Experiment: Community=Locust bean gum; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6621 and GFF6622 are separated by 2 nucleotides GFF6622 and GFF6623 are separated by 286 nucleotides
GFF6621 - Mobile element protein, at 65,600 to 67,132
GFF6621
GFF6622 - Mobile element protein, at 67,135 to 67,887
GFF6622
GFF6623 - Esterase/lipase, at 68,174 to 69,178
GFF6623
Position (kb) 67
68 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 66.287 kb on + strand, within GFF6621 at 66.287 kb on + strand, within GFF6621 at 66.397 kb on - strand, within GFF6621 at 66.397 kb on - strand, within GFF6621 at 66.591 kb on - strand, within GFF6621 at 66.621 kb on + strand, within GFF6621 at 66.621 kb on + strand, within GFF6621 at 66.621 kb on + strand, within GFF6621 at 66.622 kb on - strand, within GFF6621 at 66.622 kb on - strand, within GFF6621 at 66.622 kb on - strand, within GFF6621 at 66.793 kb on - strand, within GFF6621 at 66.881 kb on + strand, within GFF6621 at 66.882 kb on - strand, within GFF6621 at 67.118 kb on + strand at 67.119 kb on - strand at 67.119 kb on - strand at 67.119 kb on - strand at 67.130 kb on + strand at 67.130 kb on + strand at 67.131 kb on - strand at 67.147 kb on - strand at 67.201 kb on + strand at 67.201 kb on + strand at 67.357 kb on + strand, within GFF6622 at 67.357 kb on + strand, within GFF6622 at 67.357 kb on + strand, within GFF6622 at 67.358 kb on - strand, within GFF6622 at 67.534 kb on + strand, within GFF6622 at 67.534 kb on + strand, within GFF6622 at 67.534 kb on + strand, within GFF6622 at 67.534 kb on + strand, within GFF6622 at 67.535 kb on - strand, within GFF6622 at 67.535 kb on - strand, within GFF6622 at 67.535 kb on - strand, within GFF6622 at 67.535 kb on - strand, within GFF6622 at 67.612 kb on + strand, within GFF6622 at 67.612 kb on + strand, within GFF6622 at 67.613 kb on - strand, within GFF6622 at 67.629 kb on - strand, within GFF6622 at 67.912 kb on - strand at 67.912 kb on - strand at 67.912 kb on - strand at 67.937 kb on + strand at 67.938 kb on - strand at 67.992 kb on + strand at 67.998 kb on + strand at 67.998 kb on + strand at 67.998 kb on + strand at 67.998 kb on + strand at 67.999 kb on - strand at 67.999 kb on - strand at 68.092 kb on + strand at 68.093 kb on - strand at 68.093 kb on - strand at 68.141 kb on - strand at 68.141 kb on - strand at 68.627 kb on + strand, within GFF6623 at 68.752 kb on + strand, within GFF6623
Per-strain Table
Position Strand Gene LocusTag Fraction Community=Locust bean gum; Passage=4 remove 66,287 + GFF6621 0.45 -2.4 66,287 + GFF6621 0.45 -2.8 66,397 - GFF6621 0.52 -1.7 66,397 - GFF6621 0.52 +0.4 66,591 - GFF6621 0.65 -1.7 66,621 + GFF6621 0.67 -3.7 66,621 + GFF6621 0.67 -1.3 66,621 + GFF6621 0.67 -0.6 66,622 - GFF6621 0.67 -1.4 66,622 - GFF6621 0.67 -2.4 66,622 - GFF6621 0.67 -1.3 66,793 - GFF6621 0.78 -0.4 66,881 + GFF6621 0.84 +0.2 66,882 - GFF6621 0.84 +0.2 67,118 + -1.7 67,119 - +2.3 67,119 - +0.7 67,119 - +0.0 67,130 + -2.4 67,130 + -2.4 67,131 - -1.3 67,147 - -2.2 67,201 + +0.5 67,201 + -2.2 67,357 + GFF6622 0.29 +0.5 67,357 + GFF6622 0.29 -1.1 67,357 + GFF6622 0.29 -2.9 67,358 - GFF6622 0.30 +0.2 67,534 + GFF6622 0.53 -1.7 67,534 + GFF6622 0.53 -0.2 67,534 + GFF6622 0.53 -0.2 67,534 + GFF6622 0.53 +0.2 67,535 - GFF6622 0.53 -0.8 67,535 - GFF6622 0.53 -2.1 67,535 - GFF6622 0.53 -0.8 67,535 - GFF6622 0.53 -0.8 67,612 + GFF6622 0.63 -2.2 67,612 + GFF6622 0.63 +0.4 67,613 - GFF6622 0.63 +1.1 67,629 - GFF6622 0.66 -2.4 67,912 - -1.1 67,912 - -2.0 67,912 - -0.8 67,937 + -0.2 67,938 - -0.5 67,992 + -1.8 67,998 + -0.2 67,998 + -0.6 67,998 + +3.9 67,998 + -1.1 67,999 - +0.0 67,999 - -2.6 68,092 + -0.1 68,093 - -0.3 68,093 - +0.0 68,141 - -2.7 68,141 - -1.1 68,627 + GFF6623 0.45 -0.6 68,752 + GFF6623 0.58 +1.0
Or see this region's nucleotide sequence