Strain Fitness in Variovorax sp. SCN45 around GFF6209

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
116,025	+		GFF6208	0.48	-1.5
116,025	+		GFF6208	0.48	-1.2
116,025	+		GFF6208	0.48	+0.8
116,025	+		GFF6208	0.48	+0.8
116,026	-		GFF6208	0.48	+0.1
116,026	-		GFF6208	0.48	-2.1
116,166	+		GFF6208	0.57	-0.6
116,166	+		GFF6208	0.57	-0.2
116,373	+		GFF6208	0.71	+0.1
116,374	-		GFF6208	0.71	-1.3
116,374	-		GFF6208	0.71	-1.6
116,607	+		GFF6208	0.87	-1.4
116,607	+		GFF6208	0.87	-1.6
116,608	-		GFF6208	0.87	-1.1
116,655	+		GFF6208	0.90	+0.5
116,655	+		GFF6208	0.90	-0.0
116,655	+		GFF6208	0.90	-0.0
116,655	+		GFF6208	0.90	-0.0
116,656	-		GFF6208	0.90	-0.9
116,656	-		GFF6208	0.90	+0.4
116,656	-		GFF6208	0.90	+0.3
116,656	-		GFF6208	0.90	+0.8
116,716	-				-1.0
116,932	+				+0.1
116,932	+				-1.6
116,933	-				+0.8
116,933	-				-1.0
116,933	-				+0.9
116,933	-				-1.4
116,934	+				-1.5
116,934	+				-0.2
116,935	-				+0.9
116,940	+				+1.2
116,941	-				+0.5
116,941	-				-2.0
117,241	+		GFF6209	0.33	+0.9
117,241	+		GFF6209	0.33	+1.0
117,242	-		GFF6209	0.33	-1.2
117,242	-		GFF6209	0.33	-0.2
117,368	+		GFF6209	0.50	+0.1
117,818	+		GFF6210	0.10	-1.9
117,818	+		GFF6210	0.10	-0.4
117,819	-		GFF6210	0.10	-1.8
117,819	-		GFF6210	0.10	-3.7
117,819	-		GFF6210	0.10	-1.2
117,819	-		GFF6210	0.10	-0.0
117,819	-		GFF6210	0.10	+2.7
117,883	+		GFF6210	0.18	-0.5
117,883	+		GFF6210	0.18	-1.9
117,883	+		GFF6210	0.18	-1.1
117,883	+		GFF6210	0.18	+2.1
117,883	+		GFF6210	0.18	-0.1
117,884	-		GFF6210	0.18	+3.4
117,884	-		GFF6210	0.18	+0.8
118,013	+		GFF6210	0.35	-1.8
118,014	-		GFF6210	0.35	+0.3
118,014	-		GFF6210	0.35	+0.6
118,014	-		GFF6210	0.35	-2.8
118,100	+		GFF6210	0.46	+1.0
118,101	-		GFF6210	0.46	-0.7
118,101	-		GFF6210	0.46	+0.5
118,101	-		GFF6210	0.46	+1.3
118,101	-		GFF6210	0.46	-1.3
118,236	+		GFF6210	0.63	-0.7
118,236	+		GFF6210	0.63	+0.5
118,236	+		GFF6210	0.63	+1.7
118,236	+		GFF6210	0.63	-0.4
118,238	+		GFF6210	0.63	+1.1
118,238	+		GFF6210	0.63	+0.3
118,238	+		GFF6210	0.63	+1.2
118,238	+		GFF6210	0.63	-2.1
118,238	+		GFF6210	0.63	-0.5
118,239	-		GFF6210	0.63	+2.7
118,239	-		GFF6210	0.63	+0.1
118,239	-		GFF6210	0.63	-1.8
118,239	-		GFF6210	0.63	-1.1
118,239	-		GFF6210	0.63	-1.2
118,239	-		GFF6210	0.63	-1.1
118,239	-		GFF6210	0.63	+0.1
118,239	-		GFF6210	0.63	+0.4
118,564	+				-0.8
118,564	+				+0.4
118,564	+				-1.9
118,564	+				-0.2
118,565	-				-1.3
118,565	-				-4.3
118,565	-				+2.1
118,565	-				-2.1
118,565	-				-0.9
118,581	+				+1.1
118,581	+				+0.5
118,581	+				-1.1
118,581	+				-1.8
118,582	-				+0.3
118,582	-				-1.2
118,582	-				+1.2
118,602	+				-1.7
118,602	+				+0.2
118,602	+				-1.2
118,602	+				+0.8
118,603	-				-0.7
118,603	-				+1.5
118,603	-				+0.3
118,603	-				-1.1
118,603	-				-0.3
118,603	-				-1.7
118,641	+		GFF6211	0.12	+0.2