Strain Fitness in Variovorax sp. SCN45 around GFF6112

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
10,394	-		GFF6111	0.23	-0.5
10,394	-		GFF6111	0.23	-1.1
10,456	+		GFF6111	0.29	-2.0
10,456	+		GFF6111	0.29	-2.0
10,457	-		GFF6111	0.29	+0.2
10,457	-		GFF6111	0.29	+0.8
10,520	-		GFF6111	0.35	-0.4
10,846	+		GFF6111	0.68	+2.0
10,969	-		GFF6111	0.80	-1.5
11,110	+				-0.9
11,111	-				+0.1
11,111	-				+0.5
11,111	-				+1.8
11,346	-		GFF6112	0.18	-0.2
11,409	+		GFF6112	0.24	-0.2
11,409	+		GFF6112	0.24	-2.0
11,410	-		GFF6112	0.24	-1.4
11,472	+		GFF6112	0.30	+0.6
11,472	+		GFF6112	0.30	-1.6
11,472	+		GFF6112	0.30	+0.2
11,472	+		GFF6112	0.30	-0.6
11,472	+		GFF6112	0.30	-1.6
11,472	+		GFF6112	0.30	-0.7
11,472	+		GFF6112	0.30	+1.0
11,473	-		GFF6112	0.30	-0.4
11,473	-		GFF6112	0.30	-2.6
11,473	-		GFF6112	0.30	+0.7
11,473	-		GFF6112	0.30	-0.5
11,706	+		GFF6112	0.53	+0.4
11,807	+		GFF6112	0.62	-3.0
11,807	+		GFF6112	0.62	-0.7
12,073	-		GFF6112	0.88	-2.5
12,302	-		GFF6113	0.11	-2.9
13,131	-				-0.5
13,131	-				-2.3
13,191	-				-2.7
13,191	-				+0.8
13,191	-				-1.4