Strain Fitness in Variovorax sp. SCN45 around GFF6013

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
72,075	+				-3.3
72,178	+		GFF6012	0.20	+0.4
72,489	+		GFF6012	0.51	+1.3
72,873	+		GFF6012	0.89	-1.5
73,237	-		GFF6013	0.14	+0.3
73,243	-		GFF6013	0.15	+0.8
73,620	+		GFF6013	0.47	-1.2
73,620	+		GFF6013	0.47	-0.2
73,620	+		GFF6013	0.47	+2.2
73,621	-		GFF6013	0.47	-0.6
73,621	-		GFF6013	0.47	+0.9
73,834	-		GFF6013	0.66	-2.1
73,947	+		GFF6013	0.76	+2.2
73,980	+		GFF6013	0.79	+0.7
74,467	+		GFF6014	0.15	-2.1
74,468	-		GFF6014	0.15	-2.2
74,468	-		GFF6014	0.15	-0.7
74,495	+		GFF6014	0.18	+0.6
74,495	+		GFF6014	0.18	+2.5
74,495	+		GFF6014	0.18	-3.4
74,496	-		GFF6014	0.18	+0.0
74,742	-		GFF6014	0.45	-0.6