Strain Fitness in Variovorax sp. SCN45 around GFF5812

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
189,979	+		GFF5811	0.72	-1.4
189,980	-		GFF5811	0.72	-1.5
190,043	-		GFF5811	0.74	+3.8
190,117	+		GFF5811	0.76	-1.3
190,118	-		GFF5811	0.76	-1.0
190,309	+		GFF5811	0.82	-1.0
190,309	+		GFF5811	0.82	-0.2
190,340	-		GFF5811	0.83	-1.5
190,369	+		GFF5811	0.84	-2.1
190,370	-		GFF5811	0.84	-2.7
190,431	-		GFF5811	0.86	+0.8
190,580	-				-3.2
190,763	-				+0.9
190,763	-				-0.8
190,763	-				+0.0
190,763	-				-0.1
190,768	+				+0.6
190,768	+				-0.0
190,769	-				-2.5
190,769	-				+0.3
190,792	+				+1.2
190,966	+		GFF5812	0.10	+0.5
191,573	-				-2.0
191,748	+				-2.5