Strain Fitness in Variovorax sp. SCN45 around GFF4706

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
69,307	+		GFF4705	0.32	-1.8
69,308	-		GFF4705	0.32	-1.7
69,403	+		GFF4705	0.39	+0.3
69,403	+		GFF4705	0.39	+0.5
69,404	-		GFF4705	0.39	+1.2
69,493	+		GFF4705	0.46	+1.4
69,530	-		GFF4705	0.49	+0.3
69,530	-		GFF4705	0.49	+2.8
69,530	-		GFF4705	0.49	+0.7
69,532	+		GFF4705	0.49	+1.9
69,532	+		GFF4705	0.49	-2.0
69,532	+		GFF4705	0.49	-1.5
69,533	-		GFF4705	0.49	-1.4
69,533	-		GFF4705	0.49	+0.3
69,533	-		GFF4705	0.49	+0.9
69,547	+		GFF4705	0.50	+0.8
69,547	+		GFF4705	0.50	+0.3
69,547	+		GFF4705	0.50	-2.2
69,548	-		GFF4705	0.50	+0.2
69,548	-		GFF4705	0.50	+0.9
69,548	-		GFF4705	0.50	-0.7
69,548	-		GFF4705	0.50	-0.4
69,548	-		GFF4705	0.50	-1.2
69,548	-		GFF4705	0.50	-1.4
69,548	-		GFF4705	0.50	-0.1
69,682	+		GFF4705	0.60	+1.6
69,682	+		GFF4705	0.60	-0.6
69,683	-		GFF4705	0.60	+0.7
69,683	-		GFF4705	0.60	+2.9
69,683	-		GFF4705	0.60	-2.5
69,691	+		GFF4705	0.61	+0.2
69,691	+		GFF4705	0.61	-0.1
69,691	+		GFF4705	0.61	-2.4
69,691	+		GFF4705	0.61	+1.7
69,691	+		GFF4705	0.61	-0.4
69,691	+		GFF4705	0.61	+2.9
69,691	+		GFF4705	0.61	+0.3
69,692	-		GFF4705	0.61	-0.7
69,692	-		GFF4705	0.61	+0.5
69,692	-		GFF4705	0.61	-2.1
69,692	-		GFF4705	0.61	-2.4
69,692	-		GFF4705	0.61	-0.4
69,692	-		GFF4705	0.61	-1.4
69,692	-		GFF4705	0.61	-0.3
69,692	-		GFF4705	0.61	+0.0
69,692	-		GFF4705	0.61	-1.9
69,820	+		GFF4705	0.70	+1.1
69,821	-		GFF4705	0.71	+0.3
69,821	-		GFF4705	0.71	+0.2
69,821	-		GFF4705	0.71	-0.7
69,847	+		GFF4705	0.72	+0.4
69,847	+		GFF4705	0.72	+0.0
69,847	+		GFF4705	0.72	+0.1
69,847	+		GFF4705	0.72	-0.5
69,859	+		GFF4705	0.73	+0.3
69,913	+		GFF4705	0.77	-0.4
69,913	+		GFF4705	0.77	+2.2
69,913	+		GFF4705	0.77	+0.6
69,914	-		GFF4705	0.78	+1.6
69,914	-		GFF4705	0.78	+0.0
70,025	-		GFF4705	0.86	-1.4
70,141	+				+0.6
70,141	+				+0.6
70,141	+				-1.8
70,141	+				+1.9
70,142	-				-0.9
70,142	-				-0.6
70,144	+				+1.3
70,144	+				+0.6
70,144	+				+1.6
70,144	+				-0.5
70,145	-				-0.1
70,145	-				+0.4
70,145	-				-0.1
70,145	-				+0.2
70,145	-				+3.3
70,145	-				+0.2
70,145	-				-2.2
70,145	-				+0.8
70,145	-				+0.9
70,163	-				-2.3
70,263	+				+0.9
70,263	+				-0.7
70,263	+				-1.1
70,264	-				+0.5
70,264	-				+1.3
70,264	-				-0.4
70,264	-				+0.9
70,264	-				-0.1
70,868	+		GFF4706	0.69	+1.2
70,868	+		GFF4706	0.69	-3.4
70,868	+		GFF4706	0.69	-0.4
70,868	+		GFF4706	0.69	+1.2
70,868	+		GFF4706	0.69	+1.8
70,869	-		GFF4706	0.69	-2.2
70,869	-		GFF4706	0.69	+1.2
70,869	-		GFF4706	0.69	-2.0
70,962	-		GFF4706	0.80	-1.6
71,309	-		GFF4707	0.17	-2.2
71,525	-		GFF4707	0.38	-0.2
71,596	+		GFF4707	0.45	+0.1
71,597	-		GFF4707	0.45	+0.8
71,845	+		GFF4707	0.70	-1.2
71,845	+		GFF4707	0.70	+0.7
71,845	+		GFF4707	0.70	-2.7
71,845	+		GFF4707	0.70	-0.2
71,845	+		GFF4707	0.70	+0.7
71,845	+		GFF4707	0.70	-0.4
71,845	+		GFF4707	0.70	+0.7
71,846	-		GFF4707	0.70	-1.1
71,846	-		GFF4707	0.70	+0.5
71,846	-		GFF4707	0.70	-1.6
71,846	-		GFF4707	0.70	-0.5
71,846	-		GFF4707	0.70	-0.1
72,053	-				-2.3
72,053	-				+0.6
72,053	-				+0.9
72,053	-				-1.5
72,142	+				+0.7
72,143	-				-0.5
72,143	-				+1.0
72,143	-				-0.7
72,143	-				+0.3
72,143	-				+1.5