Strain Fitness in Variovorax sp. SCN45 around GFF4197

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
111,277	+				+0.6
111,277	+				-2.3
111,277	+				+1.4
111,278	-				-0.5
111,594	-		GFF4196	0.25	-0.5
111,859	-		GFF4196	0.55	+0.0
112,086	+		GFF4196	0.81	+0.4
112,086	+		GFF4196	0.81	-1.3
112,131	+		GFF4196	0.86	+0.9
112,132	-		GFF4196	0.86	-0.3
112,132	-		GFF4196	0.86	-0.6
112,132	-		GFF4196	0.86	-0.6
112,285	-				-1.5
112,635	+		GFF4197	0.41	-1.7
112,636	-		GFF4197	0.41	-2.2
113,257	-				-0.5
113,305	+				-1.7
113,305	+				-1.1
113,384	+		GFF4198	0.11	-0.7
113,504	+		GFF4198	0.22	-0.2
113,700	-		GFF4198	0.40	-0.3
113,711	+		GFF4198	0.41	-2.4
113,715	-		GFF4198	0.42	+0.9
113,985	-		GFF4198	0.66	-1.0
114,009	-		GFF4198	0.68	-0.2