Strain Fitness in Variovorax sp. SCN45 around GFF1834

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
499,387	+		GFF1833	0.69	+1.1
499,388	-		GFF1833	0.69	-0.4
499,388	-		GFF1833	0.69	+2.1
499,388	-		GFF1833	0.69	+0.8
499,388	-		GFF1833	0.69	+0.2
499,705	+				-0.9
499,706	-				+0.3
500,004	+		GFF1834	0.21	-0.9
500,005	-		GFF1834	0.21	-2.3
500,164	-		GFF1834	0.37	+0.3
500,219	+		GFF1834	0.43	-0.2
500,220	-		GFF1834	0.43	-3.3
500,220	-		GFF1834	0.43	-0.3
500,455	-		GFF1834	0.67	+0.2
500,506	-		GFF1834	0.72	-1.8
501,390	+		GFF1835	0.35	+0.3
501,391	-		GFF1835	0.35	+0.4
501,391	-		GFF1835	0.35	-2.3
501,391	-		GFF1835	0.35	+0.1