Strain Fitness in Variovorax sp. SCN45 around GFF1493

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
85,237	+				-1.8
85,238	-				+0.1
85,238	-				+2.4
85,238	-				+1.8
85,275	-				-1.5
85,499	+		GFF1492	0.28	+0.7
85,499	+		GFF1492	0.28	-0.6
85,499	+		GFF1492	0.28	+1.6
85,499	+		GFF1492	0.28	+1.1
85,500	-		GFF1492	0.29	-1.8
85,500	-		GFF1492	0.29	+0.4
85,500	-		GFF1492	0.29	+0.0
85,559	+		GFF1492	0.35	-2.3
85,559	+		GFF1492	0.35	-1.6
85,560	-		GFF1492	0.35	-1.0
85,560	-		GFF1492	0.35	-0.1
85,560	-		GFF1492	0.35	-0.4
85,560	-		GFF1492	0.35	+0.5
85,560	-		GFF1492	0.35	-0.5
85,684	+		GFF1492	0.49	+0.2
85,684	+		GFF1492	0.49	+0.8
85,684	+		GFF1492	0.49	-0.4
85,684	+		GFF1492	0.49	-2.3
85,684	+		GFF1492	0.49	+1.6
85,685	-		GFF1492	0.49	-1.3
85,685	-		GFF1492	0.49	+0.4
85,685	-		GFF1492	0.49	-0.2
85,685	-		GFF1492	0.49	-1.0
86,203	+				-0.2
86,377	+		GFF1493	0.23	+0.9
86,386	+		GFF1493	0.24	+0.0
86,573	-		GFF1493	0.44	-0.2
86,831	-		GFF1493	0.70	-3.1
86,845	+		GFF1493	0.72	-0.8
86,845	+		GFF1493	0.72	-1.6
86,845	+		GFF1493	0.72	-0.5
86,857	+		GFF1493	0.73	-0.6
87,203	-				-1.6
87,379	+		GFF1494	0.22	+1.4
87,397	+		GFF1494	0.24	+1.2
87,397	+		GFF1494	0.24	-1.1
87,671	-		GFF1494	0.52	-0.4
87,671	-		GFF1494	0.52	-0.2
87,671	-		GFF1494	0.52	-1.6
87,671	-		GFF1494	0.52	+2.0
87,826	+		GFF1494	0.68	-1.6
87,827	-		GFF1494	0.68	-2.2
87,874	+		GFF1494	0.73	-0.8
87,874	+		GFF1494	0.73	-0.8
87,874	+		GFF1494	0.73	-1.8
87,874	+		GFF1494	0.73	+1.2
87,875	-		GFF1494	0.73	-1.1