Strain Fitness in Variovorax sp. SCN45 around GFF781

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
61,744	+		GFF779	0.71	+1.4
61,744	+		GFF779	0.71	-2.0
61,763	-		GFF779	0.73	+0.4
61,869	+		GFF779	0.82	+0.7
61,869	+		GFF779	0.82	+2.2
61,997	-				-0.5
61,997	-				-3.7
62,035	+				+0.5
62,036	-				-1.4
62,036	-				+0.9
62,036	-				-0.8
62,139	+				-1.3
62,139	+				-1.3
62,140	-				+0.1
62,140	-				+0.1
62,140	-				-1.3
62,242	+				-3.4
62,242	+				-1.6
62,242	+				+0.6
62,243	-				+0.2
62,243	-				-2.7
62,243	-				-1.6
62,243	-				+0.0
62,257	-				+1.5
62,276	+				+0.5
62,277	-				+1.2
62,277	-				+0.3
62,277	-				-0.1
62,502	-		GFF780	0.55	+0.3
62,502	-		GFF780	0.55	+0.5
62,546	+		GFF780	0.66	+0.5
62,615	+		GFF780	0.82	-2.2
62,615	+		GFF780	0.82	-0.9
62,615	+		GFF780	0.82	+0.6
62,615	+		GFF780	0.82	-0.3
62,615	+		GFF780	0.82	-1.8
62,616	-		GFF780	0.82	-1.3
62,616	-		GFF780	0.82	-0.5
62,616	-		GFF780	0.82	-0.3
62,616	-		GFF780	0.82	+0.3
62,642	-		GFF780	0.88	-0.8
62,690	+				-0.9
62,690	+				-2.5
62,691	-				-0.1
62,691	-				-0.4
62,755	+				+1.4
63,410	-		GFF781	0.39	-0.1
63,559	+		GFF781	0.47	-0.5
63,559	+		GFF781	0.47	-2.8
63,634	+		GFF781	0.51	-0.5
63,640	+		GFF781	0.52	-0.3
63,640	+		GFF781	0.52	-3.8
63,640	+		GFF781	0.52	-1.3
63,641	-		GFF781	0.52	-0.1
63,641	-		GFF781	0.52	-3.1
63,641	-		GFF781	0.52	-0.1
63,700	+		GFF781	0.55	-1.1
63,700	+		GFF781	0.55	-2.9
63,700	+		GFF781	0.55	+1.6
63,700	+		GFF781	0.55	-0.7
63,700	+		GFF781	0.55	-0.1
63,701	-		GFF781	0.55	+1.7
63,701	-		GFF781	0.55	-1.1
63,701	-		GFF781	0.55	-3.0
63,902	-		GFF781	0.66	-3.5
63,985	+		GFF781	0.70	+1.2
64,193	-		GFF781	0.82	-0.3
64,193	-		GFF781	0.82	+1.7
64,193	-		GFF781	0.82	+0.5
64,282	+		GFF781	0.86	-0.1
64,282	+		GFF781	0.86	-0.8
64,283	-		GFF781	0.86	-1.8
64,283	-		GFF781	0.86	-2.4
64,465	+				+0.4
64,465	+				-2.4
64,466	-				+1.7
64,537	-				+0.4
64,682	+		GFF782	0.20	+0.1
64,683	-		GFF782	0.20	-0.8
64,764	+		GFF782	0.32	-2.9
64,765	-		GFF782	0.32	+0.2
64,815	+		GFF782	0.39	+1.9
64,816	-		GFF782	0.39	-0.0
65,268	+				-0.0
65,268	+				+0.7
65,268	+				-0.8
65,289	+				+1.4
65,289	+				-2.6
65,292	+				+1.7
65,292	+				+0.8
65,293	-				-0.5
65,293	-				-4.3