Strain Fitness in Variovorax sp. SCN45 around GFF7382

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
69	+				+1.8
69	+				+0.1
92	-				+0.7
119	+		GFF7382	0.12	+0.3
265	-		GFF7382	0.63	-0.9
295	-		GFF7382	0.73	+1.8
437	+				+0.3
538	+				-2.5
538	+				-0.5
539	-				+0.4
539	-				+0.6
539	-				-1.2
539	-				-1.3
599	-				-3.3
697	+				-1.3
698	-				+0.3
999	+				-0.1
999	+				-2.0
1,119	-		GFF7383	0.21	-0.2
1,119	-		GFF7383	0.21	-0.7
1,164	-		GFF7383	0.25	+0.2
1,205	+		GFF7383	0.30	-1.0
1,205	+		GFF7383	0.30	-1.3
1,348	+		GFF7383	0.44	+0.6