Strain Fitness in Variovorax sp. SCN45 around GFF7352

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
932	-		GFF7351	0.39	+0.6
1,198	-		GFF7351	0.62	-0.8
1,223	+		GFF7351	0.64	+0.6
1,223	+		GFF7351	0.64	+0.2
1,223	+		GFF7351	0.64	+1.9
1,224	-		GFF7351	0.64	+0.4
1,397	+		GFF7351	0.79	-1.0
1,445	+		GFF7351	0.83	+0.5
1,617	+				+0.5
1,694	+				-0.0
1,694	+				-0.6
1,695	-				+1.9
1,695	-				-0.2
1,716	+				-1.1
1,716	+				-1.5
2,016	-		GFF7352	0.66	-1.7
2,203	+				-1.6
2,362	-		GFF7353	0.23	+1.2
2,395	+		GFF7353	0.28	+1.4
2,437	+		GFF7353	0.33	+2.2
2,437	+		GFF7353	0.33	-0.2
2,437	+		GFF7353	0.33	+0.0
2,437	+		GFF7353	0.33	+2.0
2,437	+		GFF7353	0.33	-2.3
2,438	-		GFF7353	0.33	-0.6
2,438	-		GFF7353	0.33	+0.8
2,611	+		GFF7353	0.56	+1.1
2,612	-		GFF7353	0.56	-2.1
2,632	+		GFF7353	0.59	-2.2
2,777	-		GFF7353	0.78	+1.6
2,777	-		GFF7353	0.78	+0.5
2,915	-				+1.0
2,976	+		GFF7354	0.11	-0.4
2,976	+		GFF7354	0.11	+0.3
2,976	+		GFF7354	0.11	-1.3
2,994	+		GFF7354	0.17	-1.0
2,994	+		GFF7354	0.17	-1.2
3,111	+		GFF7354	0.56	-2.0
3,111	+		GFF7354	0.56	-1.3