Strain Fitness in Variovorax sp. SCN45 around GFF7282

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
52	+		GFF7282	0.40	-1.6
52	+		GFF7282	0.40	-4.0
52	+		GFF7282	0.40	+0.8
52	+		GFF7282	0.40	-0.2
52	+		GFF7282	0.40	+0.4
88	-		GFF7282	0.69	-1.4
105	+		GFF7282	0.83	-1.6
106	-		GFF7282	0.83	-1.5
124	+				+0.4
124	+				-0.3
124	+				-1.0
124	+				+0.5
124	+				-2.1
125	-				-0.1
125	-				+0.5
125	-				-2.3
254	-				+0.6
276	+				-0.3
276	+				-1.9
277	-				-0.0
334	+				-0.5
334	+				-2.4
334	+				-0.1
335	-				-0.6
335	-				-0.4
352	+				-0.3
352	+				+1.4
353	-				+0.1
353	-				+1.5
353	-				+0.7
419	-		GFF7283	0.11	-3.1
419	-		GFF7283	0.11	+0.7
547	+		GFF7283	0.19	+0.4
547	+		GFF7283	0.19	+0.2
548	-		GFF7283	0.19	-0.1
721	+		GFF7283	0.29	-0.3
721	+		GFF7283	0.29	+0.7
721	+		GFF7283	0.29	+2.4
721	+		GFF7283	0.29	-1.3
721	+		GFF7283	0.29	-2.9
721	+		GFF7283	0.29	+0.4
721	+		GFF7283	0.29	+0.8
722	-		GFF7283	0.30	-1.4
722	-		GFF7283	0.30	+1.1
722	-		GFF7283	0.30	+0.0
722	-		GFF7283	0.30	+0.5
862	+		GFF7283	0.38	-2.7
862	+		GFF7283	0.38	-0.4
862	+		GFF7283	0.38	-0.5
862	+		GFF7283	0.38	+0.9
862	+		GFF7283	0.38	-1.6
862	+		GFF7283	0.38	+1.8
862	+		GFF7283	0.38	-0.6
863	-		GFF7283	0.38	-1.2
863	-		GFF7283	0.38	-0.8
1,015	+		GFF7283	0.47	-3.3
1,015	+		GFF7283	0.47	-0.9
1,015	+		GFF7283	0.47	+0.2
1,016	-		GFF7283	0.47	-0.2
1,016	-		GFF7283	0.47	+1.7