Strain Fitness in Variovorax sp. SCN45 around GFF7157

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
20,924	+		GFF7156	0.23	+2.3
20,924	+		GFF7156	0.23	-2.8
20,924	+		GFF7156	0.23	-0.3
20,924	+		GFF7156	0.23	+0.7
20,924	+		GFF7156	0.23	-1.6
20,925	-		GFF7156	0.23	-0.0
20,925	-		GFF7156	0.23	-0.3
20,925	-		GFF7156	0.23	+0.4
21,197	+		GFF7156	0.51	-1.6
21,197	+		GFF7156	0.51	+1.8
21,197	+		GFF7156	0.51	-1.6
21,197	+		GFF7156	0.51	-1.5
21,197	+		GFF7156	0.51	-0.3
21,197	+		GFF7156	0.51	-1.5
21,197	+		GFF7156	0.51	-1.0
21,197	+		GFF7156	0.51	-0.9
21,197	+		GFF7156	0.51	-0.9
21,197	+		GFF7156	0.51	-2.1
21,197	+		GFF7156	0.51	+0.2
21,197	+		GFF7156	0.51	-2.1
21,197	+		GFF7156	0.51	-2.2
21,197	+		GFF7156	0.51	+0.4
21,198	-		GFF7156	0.51	-1.8
21,198	-		GFF7156	0.51	-0.7
21,198	-		GFF7156	0.51	+0.8
21,198	-		GFF7156	0.51	-2.8
21,198	-		GFF7156	0.51	+0.7
21,198	-		GFF7156	0.51	-1.3
21,198	-		GFF7156	0.51	-2.5
21,198	-		GFF7156	0.51	-1.7
21,198	-		GFF7156	0.51	-1.0
21,198	-		GFF7156	0.51	-0.8
21,198	-		GFF7156	0.51	-0.3
21,198	-		GFF7156	0.51	-0.5
21,198	-		GFF7156	0.51	-2.9
21,198	-		GFF7156	0.51	-0.6
21,198	-		GFF7156	0.51	-4.0
21,198	-		GFF7156	0.51	-2.2
21,198	-		GFF7156	0.51	+0.6
21,198	-		GFF7156	0.51	+1.6
21,198	-		GFF7156	0.51	-2.1
21,203	+		GFF7156	0.51	+1.1
21,203	+		GFF7156	0.51	+0.1
21,203	+		GFF7156	0.51	+0.7
21,203	+		GFF7156	0.51	-0.6
21,203	+		GFF7156	0.51	-0.7
21,203	+		GFF7156	0.51	-0.3
21,203	+		GFF7156	0.51	+0.3
21,203	+		GFF7156	0.51	+1.1
21,203	+		GFF7156	0.51	+1.6
21,203	+		GFF7156	0.51	-0.1
21,203	+		GFF7156	0.51	+0.4
21,204	-		GFF7156	0.51	-0.6
21,204	-		GFF7156	0.51	+0.5
21,204	-		GFF7156	0.51	-2.1
21,204	-		GFF7156	0.51	-1.4
21,204	-		GFF7156	0.51	-2.2
21,204	-		GFF7156	0.51	-2.3
21,204	-		GFF7156	0.51	+0.7
21,204	-		GFF7156	0.51	-0.8
21,204	-		GFF7156	0.51	-1.1
21,204	-		GFF7156	0.51	+1.1
21,204	-		GFF7156	0.51	-1.4
21,204	-		GFF7156	0.51	-1.2
21,204	-		GFF7156	0.51	-3.3
21,204	-		GFF7156	0.51	+0.3
21,204	-		GFF7156	0.51	+0.7
21,204	-		GFF7156	0.51	-1.4
21,204	-		GFF7156	0.51	-1.1
21,204	-		GFF7156	0.51	-1.8
21,204	-		GFF7156	0.51	-1.2
21,204	-		GFF7156	0.51	-2.2
21,204	-		GFF7156	0.51	+4.7
21,284	+		GFF7156	0.59	-1.1
21,284	+		GFF7156	0.59	+1.3
21,284	+		GFF7156	0.59	+0.5
21,284	+		GFF7156	0.59	-1.3
21,284	+		GFF7156	0.59	+0.6
21,284	+		GFF7156	0.59	-2.5
21,284	+		GFF7156	0.59	+0.3
21,284	+		GFF7156	0.59	+0.0
21,284	+		GFF7156	0.59	-0.5
21,284	+		GFF7156	0.59	-0.3
21,284	+		GFF7156	0.59	-0.9
21,285	-		GFF7156	0.59	-0.9
21,285	-		GFF7156	0.59	-0.5
21,285	-		GFF7156	0.59	-1.5
21,285	-		GFF7156	0.59	-1.5
21,285	-		GFF7156	0.59	+0.7
21,285	-		GFF7156	0.59	-0.8
21,285	-		GFF7156	0.59	-1.3
21,285	-		GFF7156	0.59	+1.3
21,285	-		GFF7156	0.59	-0.6
21,285	-		GFF7156	0.59	+1.4
21,285	-		GFF7156	0.59	-2.3
21,285	-		GFF7156	0.59	-2.7
21,285	-		GFF7156	0.59	-3.0
21,285	-		GFF7156	0.59	-2.3
21,285	-		GFF7156	0.59	-0.6
21,335	+		GFF7156	0.64	-1.4
21,335	+		GFF7156	0.64	-2.5
21,335	+		GFF7156	0.64	-2.2
21,335	+		GFF7156	0.64	-1.0
21,335	+		GFF7156	0.64	+1.2
21,336	-		GFF7156	0.64	+0.3
21,336	-		GFF7156	0.64	-0.2
21,336	-		GFF7156	0.64	+0.6
21,336	-		GFF7156	0.64	-2.5
21,336	-		GFF7156	0.64	-1.0
21,336	-		GFF7156	0.64	+0.3
21,336	-		GFF7156	0.64	-2.9
21,336	-		GFF7156	0.64	-1.6
21,336	-		GFF7156	0.64	-0.7
21,336	-		GFF7156	0.64	-0.5
21,336	-		GFF7156	0.64	-2.3
21,336	-		GFF7156	0.64	-0.1
21,336	-		GFF7156	0.64	-3.1
21,350	+		GFF7156	0.66	-2.4
21,350	+		GFF7156	0.66	-0.7
21,350	+		GFF7156	0.66	-0.2
21,350	+		GFF7156	0.66	-0.3
21,351	-		GFF7156	0.66	-0.7
21,586	+		GFF7156	0.89	+0.6
21,586	+		GFF7156	0.89	+0.2
21,586	+		GFF7156	0.89	+0.6
21,586	+		GFF7156	0.89	-0.0
21,586	+		GFF7156	0.89	-0.8
21,586	+		GFF7156	0.89	+1.4
21,586	+		GFF7156	0.89	-0.7
21,586	+		GFF7156	0.89	-1.1
21,587	-		GFF7156	0.89	-0.7
21,587	-		GFF7156	0.89	+1.1
21,587	-		GFF7156	0.89	-1.9
21,587	-		GFF7156	0.89	+0.2
21,587	-		GFF7156	0.89	-0.6
21,587	-		GFF7156	0.89	-0.8
21,587	-		GFF7156	0.89	-1.8
21,587	-		GFF7156	0.89	-0.7
21,587	-		GFF7156	0.89	+2.7
21,587	-		GFF7156	0.89	-2.6
21,753	+				-1.4
21,753	+				-0.5
21,753	+				-1.0
21,753	+				-1.5
21,753	+				+0.9
21,753	+				+0.9
21,753	+				-1.2
21,753	+				+1.5
21,753	+				+0.3
21,753	+				-2.5
21,753	+				-0.7
21,753	+				-0.1
21,753	+				+2.3
21,754	-				+1.3
21,754	-				-1.8
21,754	-				+1.7
21,754	-				-2.1
21,754	-				-2.8
21,754	-				+0.7
21,754	-				-2.3
21,754	-				+0.5
21,873	+		GFF7157	0.14	-0.1
21,873	+		GFF7157	0.14	+0.4
22,038	+		GFF7157	0.27	-2.3
22,038	+		GFF7157	0.27	+0.6
22,038	+		GFF7157	0.27	-0.1
22,038	+		GFF7157	0.27	-2.1
22,038	+		GFF7157	0.27	-1.2
22,038	+		GFF7157	0.27	+1.5
22,038	+		GFF7157	0.27	-0.4
22,038	+		GFF7157	0.27	-1.9
22,038	+		GFF7157	0.27	-2.6
22,038	+		GFF7157	0.27	-0.5
22,038	+		GFF7157	0.27	-2.5
22,038	+		GFF7157	0.27	+1.3
22,038	+		GFF7157	0.27	-0.8
22,039	-		GFF7157	0.27	-0.9
22,039	-		GFF7157	0.27	+0.8
22,039	-		GFF7157	0.27	-2.8
22,039	-		GFF7157	0.27	-0.8
22,039	-		GFF7157	0.27	-1.0
22,039	-		GFF7157	0.27	-3.1
22,039	-		GFF7157	0.27	+2.7
22,039	-		GFF7157	0.27	+0.9
22,039	-		GFF7157	0.27	-1.9
22,039	-		GFF7157	0.27	-0.9
22,039	-		GFF7157	0.27	+0.6
22,039	-		GFF7157	0.27	-1.1
22,039	-		GFF7157	0.27	-1.8
22,039	-		GFF7157	0.27	+1.2
22,039	-		GFF7157	0.27	-1.1
22,039	-		GFF7157	0.27	-0.3
22,039	-		GFF7157	0.27	+0.3
22,039	-		GFF7157	0.27	-2.9
22,039	-		GFF7157	0.27	+1.2
22,350	+		GFF7157	0.53	-0.2
22,350	+		GFF7157	0.53	+0.2
22,350	+		GFF7157	0.53	+0.7
22,350	+		GFF7157	0.53	-0.6
22,350	+		GFF7157	0.53	+1.8
22,350	+		GFF7157	0.53	-0.8
22,350	+		GFF7157	0.53	+0.1
22,350	+		GFF7157	0.53	+0.3
22,350	+		GFF7157	0.53	+0.9
22,350	+		GFF7157	0.53	-1.1
22,350	+		GFF7157	0.53	+0.1
22,350	+		GFF7157	0.53	+0.3
22,350	+		GFF7157	0.53	-2.8
22,350	+		GFF7157	0.53	+1.4
22,350	+		GFF7157	0.53	+0.6
22,350	+		GFF7157	0.53	+1.3
22,350	+		GFF7157	0.53	+0.1
22,350	+		GFF7157	0.53	-0.7
22,351	-		GFF7157	0.53	-1.0
22,351	-		GFF7157	0.53	-1.1
22,351	-		GFF7157	0.53	+0.0
22,351	-		GFF7157	0.53	+1.5
22,351	-		GFF7157	0.53	+3.1
22,351	-		GFF7157	0.53	-2.0
22,351	-		GFF7157	0.53	+0.5
22,351	-		GFF7157	0.53	-1.3
22,351	-		GFF7157	0.53	-0.7
22,351	-		GFF7157	0.53	+0.3
22,351	-		GFF7157	0.53	+0.1
22,351	-		GFF7157	0.53	+2.3
22,351	-		GFF7157	0.53	+3.3
22,351	-		GFF7157	0.53	-2.4
22,351	-		GFF7157	0.53	+2.0
22,351	-		GFF7157	0.53	-0.3
22,351	-		GFF7157	0.53	-0.5
22,351	-		GFF7157	0.53	+1.2
22,351	-		GFF7157	0.53	-1.4
22,757	+		GFF7157	0.87	-1.9
22,994	+				-3.3
22,994	+				-1.8
22,994	+				+0.7
22,994	+				+0.4
22,994	+				-1.3
22,994	+				-0.8
22,994	+				-0.1
22,995	-				+2.7
22,995	-				-0.1
22,995	-				+0.6
22,995	-				-3.9
23,087	+		GFF7158	0.11	-4.1
23,087	+		GFF7158	0.11	+0.9
23,087	+		GFF7158	0.11	+0.1
23,087	+		GFF7158	0.11	-1.4
23,087	+		GFF7158	0.11	-0.2
23,087	+		GFF7158	0.11	+1.6
23,087	+		GFF7158	0.11	-2.7
23,088	-		GFF7158	0.11	-0.3
23,297	+		GFF7158	0.36	-2.3
23,297	+		GFF7158	0.36	-0.5
23,298	-		GFF7158	0.36	-0.1
23,336	+		GFF7158	0.40	+1.0
23,336	+		GFF7158	0.40	-0.7
23,336	+		GFF7158	0.40	+0.7
23,336	+		GFF7158	0.40	+0.7
23,336	+		GFF7158	0.40	+0.8
23,336	+		GFF7158	0.40	+0.2
23,336	+		GFF7158	0.40	-3.3
23,336	+		GFF7158	0.40	-0.1
23,336	+		GFF7158	0.40	+0.2
23,336	+		GFF7158	0.40	+1.8
23,336	+		GFF7158	0.40	+0.4
23,336	+		GFF7158	0.40	-1.3
23,337	-		GFF7158	0.40	-2.6
23,337	-		GFF7158	0.40	+1.3
23,337	-		GFF7158	0.40	+0.3
23,337	-		GFF7158	0.40	-0.5
23,337	-		GFF7158	0.40	-2.3
23,337	-		GFF7158	0.40	-1.7
23,337	-		GFF7158	0.40	-0.8
23,337	-		GFF7158	0.40	-1.6
23,337	-		GFF7158	0.40	-1.4
23,337	-		GFF7158	0.40	-2.4
23,337	-		GFF7158	0.40	-1.3
23,438	+		GFF7158	0.52	-0.8
23,438	+		GFF7158	0.52	+0.0
23,438	+		GFF7158	0.52	+0.8
23,438	+		GFF7158	0.52	+1.3
23,438	+		GFF7158	0.52	+0.7
23,438	+		GFF7158	0.52	+0.7
23,438	+		GFF7158	0.52	+0.4
23,438	+		GFF7158	0.52	+1.1
23,438	+		GFF7158	0.52	+1.8
23,438	+		GFF7158	0.52	+1.6
23,438	+		GFF7158	0.52	-1.9
23,438	+		GFF7158	0.52	+1.3
23,438	+		GFF7158	0.52	-1.8
23,438	+		GFF7158	0.52	+0.7
23,438	+		GFF7158	0.52	-0.4
23,438	+		GFF7158	0.52	+0.0
23,439	-		GFF7158	0.52	-0.7
23,439	-		GFF7158	0.52	-1.1
23,439	-		GFF7158	0.52	+1.8
23,439	-		GFF7158	0.52	-0.1
23,439	-		GFF7158	0.52	-0.5
23,439	-		GFF7158	0.52	-1.6
23,439	-		GFF7158	0.52	+0.3
23,439	-		GFF7158	0.52	+0.2
23,439	-		GFF7158	0.52	-0.7
23,439	-		GFF7158	0.52	-1.6
23,439	-		GFF7158	0.52	-0.5
23,439	-		GFF7158	0.52	-1.8
23,439	-		GFF7158	0.52	-2.1
23,439	-		GFF7158	0.52	+1.4
23,439	-		GFF7158	0.52	-2.6
23,439	-		GFF7158	0.52	+0.3
23,615	+		GFF7158	0.73	-1.9
23,615	+		GFF7158	0.73	+2.8
23,615	+		GFF7158	0.73	+1.9
23,615	+		GFF7158	0.73	+0.5
23,615	+		GFF7158	0.73	-0.3
23,615	+		GFF7158	0.73	-1.6
23,615	+		GFF7158	0.73	-0.5
23,616	-		GFF7158	0.73	-2.2
23,616	-		GFF7158	0.73	+0.5
23,616	-		GFF7158	0.73	+0.9
23,616	-		GFF7158	0.73	-0.5
23,639	+		GFF7158	0.76	-0.0
23,639	+		GFF7158	0.76	+0.8
23,639	+		GFF7158	0.76	+0.7
23,639	+		GFF7158	0.76	-0.8
23,639	+		GFF7158	0.76	-1.8
23,640	-		GFF7158	0.76	+2.3
23,640	-		GFF7158	0.76	-0.9
23,640	-		GFF7158	0.76	-1.3
23,640	-		GFF7158	0.76	-2.3
23,640	-		GFF7158	0.76	+0.9
23,640	-		GFF7158	0.76	-0.9
23,807	+				-0.5
23,808	-				+2.3
23,808	-				-1.8
23,808	-				+0.0
23,830	-				+1.3