Strain Fitness in Variovorax sp. SCN45 around GFF6921

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
58	+		GFF6920	0.70	-2.8
324	+		GFF6921	0.49	-0.8
324	+		GFF6921	0.49	-1.5
325	-		GFF6921	0.50	-0.1
325	-		GFF6921	0.50	-0.8
325	-		GFF6921	0.50	-0.2
325	-		GFF6921	0.50	-1.0
325	-		GFF6921	0.50	+0.2
396	+		GFF6921	0.66	-0.4
396	+		GFF6921	0.66	-2.9
628	+				+2.2
740	-		GFF6922	0.13	-1.2
1,327	+		GFF6922	0.77	-0.3
1,327	+		GFF6922	0.77	+0.6
1,327	+		GFF6922	0.77	-1.4
1,327	+		GFF6922	0.77	+1.1
1,396	+		GFF6922	0.84	+2.2
1,397	-		GFF6922	0.84	-0.2
1,478	-				+0.7