Strain Fitness in Variovorax sp. SCN45 around GFF6714

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
21,312	+				-2.2
21,313	-				-0.3
21,313	-				-0.5
21,313	-				+1.7
21,313	-				+0.5
21,313	-				-1.4
21,313	-				-0.2
21,313	-				+1.3
21,373	-				-0.9
21,485	-		GFF6713	0.16	-0.9
21,485	-		GFF6713	0.16	-2.4
21,485	-		GFF6713	0.16	-0.0
22,002	+		GFF6713	0.69	-0.8
22,003	-		GFF6713	0.69	+1.7
22,003	-		GFF6713	0.69	-2.0
22,066	-		GFF6713	0.76	+2.1
22,257	+				+0.7
22,258	-				-0.5
22,258	-				-1.7
22,258	-				-1.5
22,269	-				-0.5
22,666	+		GFF6714	0.28	+0.2
22,822	-		GFF6714	0.40	-0.5
22,822	-		GFF6714	0.40	+0.5
22,822	-		GFF6714	0.40	-3.9
22,952	+		GFF6714	0.49	-0.8
22,952	+		GFF6714	0.49	-0.5
22,952	+		GFF6714	0.49	-1.0
22,998	-		GFF6714	0.53	-2.3
22,998	-		GFF6714	0.53	+1.1
23,177	+		GFF6714	0.67	+0.3
23,177	+		GFF6714	0.67	+1.3
23,177	+		GFF6714	0.67	-0.8
23,178	-		GFF6714	0.67	+2.1
23,178	-		GFF6714	0.67	-1.9
23,178	-		GFF6714	0.67	-1.1
23,457	-		GFF6714	0.88	+0.8
23,663	-				-1.4
24,034	-		GFF6715	0.45	+0.3
24,123	+		GFF6715	0.55	+0.7
24,123	+		GFF6715	0.55	-1.0
24,123	+		GFF6715	0.55	+0.1
24,124	-		GFF6715	0.55	+2.1
24,354	+		GFF6715	0.81	-3.7
24,354	+		GFF6715	0.81	-2.0
24,382	+		GFF6715	0.84	-3.4
24,382	+		GFF6715	0.84	+0.1