Strain Fitness in Variovorax sp. SCN45 around GFF6431

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
3,787	+		GFF6430	0.38	-0.7
3,787	+		GFF6430	0.38	+1.1
3,787	+		GFF6430	0.38	-0.1
3,787	+		GFF6430	0.38	-0.1
3,787	+		GFF6430	0.38	+1.4
3,787	+		GFF6430	0.38	-3.4
3,788	-		GFF6430	0.38	-0.1
3,788	-		GFF6430	0.38	-1.8
3,788	-		GFF6430	0.38	+0.9
3,788	-		GFF6430	0.38	+1.4
3,788	-		GFF6430	0.38	-1.6
3,788	-		GFF6430	0.38	-2.5
3,809	-		GFF6430	0.40	-1.8
3,919	+		GFF6430	0.49	-0.7
4,072	+		GFF6430	0.62	-1.7
4,073	-		GFF6430	0.62	+0.6
4,541	+				+0.8
4,542	-				-0.2
4,542	-				-0.9
4,554	+				-0.7
4,631	+				-2.1
4,748	+		GFF6431	0.15	-1.2
4,749	-		GFF6431	0.15	-1.3
4,749	-		GFF6431	0.15	+1.2
4,749	-		GFF6431	0.15	-0.1
4,916	+		GFF6431	0.37	-1.0
5,159	+		GFF6431	0.68	-1.5
5,336	+				-1.9
5,530	+		GFF6432	0.17	-0.1
5,531	-		GFF6432	0.18	-2.5
6,284	+				-1.1
6,285	-				-2.6