Strain Fitness in Variovorax sp. SCN45 around GFF5906

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
121,140	-				-0.3
121,140	-				+0.1
121,140	-				+1.6
121,191	+				-0.0
121,191	+				-0.5
121,191	+				+0.2
121,191	+				+0.8
121,192	-				+0.5
121,192	-				+0.0
121,192	-				+1.2
121,591	+				+2.2
121,604	-		GFF5905	0.11	-0.8
121,882	+		GFF5905	0.68	+0.5
121,882	+		GFF5905	0.68	-1.3
121,882	+		GFF5905	0.68	-0.1
121,882	+		GFF5905	0.68	-2.0
121,882	+		GFF5905	0.68	+1.0
121,882	+		GFF5905	0.68	+0.6
121,882	+		GFF5905	0.68	+0.1
121,883	-		GFF5905	0.69	-1.0
121,883	-		GFF5905	0.69	-1.6
121,883	-		GFF5905	0.69	-1.3
121,883	-		GFF5905	0.69	-0.6
121,883	-		GFF5905	0.69	+1.2
121,912	+		GFF5905	0.75	+1.9
122,205	+		GFF5906	0.15	-0.8
122,206	-		GFF5906	0.15	-0.2
122,206	-		GFF5906	0.15	+1.0
122,206	-		GFF5906	0.15	-2.6
122,208	+		GFF5906	0.15	-0.1
122,215	-		GFF5906	0.16	-0.3
122,215	-		GFF5906	0.16	+4.9
122,382	+		GFF5906	0.32	-0.8
122,382	+		GFF5906	0.32	+0.6
122,383	-		GFF5906	0.32	-1.5
122,383	-		GFF5906	0.32	-0.8
122,550	+		GFF5906	0.48	-2.3
122,550	+		GFF5906	0.48	+0.9
122,551	-		GFF5906	0.48	+0.2
122,551	-		GFF5906	0.48	-2.1
122,916	+		GFF5906	0.83	+2.6
123,311	-		GFF5907	0.24	-0.2
123,311	-		GFF5907	0.24	-0.1
123,853	+		GFF5907	0.74	-1.9
123,853	+		GFF5907	0.74	-1.2