Strain Fitness in Variovorax sp. SCN45 around GFF4469

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
109,371	-				-3.4
109,371	-				-2.5
109,379	-				-3.0
109,379	-				-0.4
109,379	-				-3.3
109,385	-				-1.4
109,525	+				-0.6
109,525	+				+2.2
109,525	+				+0.2
109,525	+				-1.3
109,526	-				+0.2
109,526	-				-0.6
109,636	-		GFF4469	0.10	-1.8
109,636	-		GFF4469	0.10	-3.9
109,680	-		GFF4469	0.14	-1.5
110,744	-				-0.2
110,744	-				-3.1
110,744	-				-3.4
110,744	-				-2.5
110,744	-				+1.2
110,744	-				-1.4
110,744	-				-1.5
110,744	-				-0.0
110,744	-				-3.5
110,770	-				-0.6
110,770	-				-3.5
111,560	+				-0.4
111,560	+				-0.8
111,560	+				-1.0
111,560	+				+2.3
111,560	+				-3.1
111,560	+				-0.4
111,560	+				+1.2
111,560	+				+0.4
111,561	-				-1.3
111,561	-				+3.7
111,561	-				-0.6
111,561	-				-3.5
111,563	-				-0.4