Strain Fitness in Variovorax sp. SCN45 around GFF4281

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
199,991	+		GFF4280	0.15	+0.4
199,991	+		GFF4280	0.15	-0.7
199,991	+		GFF4280	0.15	-0.4
199,992	-		GFF4280	0.15	+0.0
200,389	-		GFF4280	0.55	-1.6
200,417	+		GFF4280	0.58	-0.2
200,649	-		GFF4280	0.81	+0.1
201,114	-		GFF4281	0.18	+0.2
201,114	-		GFF4281	0.18	+1.0
201,125	+		GFF4281	0.20	+0.9
201,380	+		GFF4281	0.53	-0.4
201,624	+		GFF4281	0.85	-1.4
201,625	-		GFF4281	0.85	+0.9
202,068	-		GFF4282	0.17	-1.6
202,276	+		GFF4282	0.37	-0.7
202,473	+		GFF4282	0.57	+1.1
202,474	-		GFF4282	0.57	+0.6
202,480	+		GFF4282	0.58	+0.1
202,511	+		GFF4282	0.61	-1.4