Strain Fitness in Variovorax sp. SCN45 around GFF4059

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
272,522	-		GFF4058	0.65	+2.0
272,577	-		GFF4058	0.69	+1.2
272,727	+		GFF4058	0.80	+1.6
272,728	-		GFF4058	0.80	-2.0
272,728	-		GFF4058	0.80	+0.2
273,024	+				-1.6
273,258	+		GFF4059	0.27	-0.9
273,259	-		GFF4059	0.27	-0.6
273,259	-		GFF4059	0.27	+2.2
273,425	+		GFF4059	0.64	-0.1
273,454	+		GFF4059	0.71	-0.3
273,455	-		GFF4059	0.71	-0.8
273,455	-		GFF4059	0.71	+0.3
273,455	-		GFF4059	0.71	-0.8
273,505	-		GFF4059	0.82	+0.8
273,733	+				+0.9
273,948	-		GFF4060	0.22	+1.0
274,217	+		GFF4060	0.82	+0.8
274,217	+		GFF4060	0.82	+0.2
274,217	+		GFF4060	0.82	-2.8
274,217	+		GFF4060	0.82	-3.3
274,218	-		GFF4060	0.82	-1.3
274,218	-		GFF4060	0.82	-1.8
274,218	-		GFF4060	0.82	+0.3
274,515	+				-2.1
274,515	+				+1.0