Strain Fitness in Variovorax sp. SCN45 around GFF6084

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
145,137	+				-2.9
145,137	+				+0.9
145,138	-				-3.1
145,138	-				+0.8
145,310	-		GFF6083	0.19	-2.2
145,310	-		GFF6083	0.19	-1.2
145,310	-		GFF6083	0.19	-0.2
145,546	+		GFF6083	0.43	-1.0
146,053	-				+0.2
146,053	-				-1.3
146,170	-				+1.2
146,170	-				+0.6
146,170	-				-1.8
146,170	-				+0.2
146,170	-				-0.8
146,182	+				+1.4
146,182	+				-1.2
146,183	-				-0.2
146,211	+		GFF6084	0.10	+0.2
146,211	+		GFF6084	0.10	-3.0
146,212	-		GFF6084	0.10	+0.3
146,212	-		GFF6084	0.10	-1.6
146,853	+		GFF6084	0.72	+1.1
146,853	+		GFF6084	0.72	-0.9
146,853	+		GFF6084	0.72	+1.2
146,854	-		GFF6084	0.72	-1.0
146,854	-		GFF6084	0.72	-0.6
146,854	-		GFF6084	0.72	-1.3
146,970	+		GFF6084	0.83	-0.3
146,971	-		GFF6084	0.83	-0.9
146,971	-		GFF6084	0.83	-0.2
146,971	-		GFF6084	0.83	-0.8
146,976	+		GFF6084	0.84	-0.9
146,976	+		GFF6084	0.84	-2.2
146,976	+		GFF6084	0.84	-1.2
146,977	-		GFF6084	0.84	-3.2
146,977	-		GFF6084	0.84	+1.4
147,009	+		GFF6084	0.87	-0.6
147,141	+				-1.3
147,250	-		GFF6085	0.19	-0.3
147,250	-		GFF6085	0.19	+1.2
147,269	+		GFF6085	0.22	-2.3
147,270	-		GFF6085	0.22	+0.7
147,270	-		GFF6085	0.22	-2.3
147,357	+		GFF6085	0.37	-1.9
147,358	-		GFF6085	0.37	+0.2
147,358	-		GFF6085	0.37	-0.4
147,462	+		GFF6085	0.55	-2.5
147,462	+		GFF6085	0.55	-1.4
147,462	+		GFF6085	0.55	-0.6
147,462	+		GFF6085	0.55	-0.6
147,462	+		GFF6085	0.55	-0.8
147,462	+		GFF6085	0.55	-1.5
147,463	-		GFF6085	0.55	+0.2
147,463	-		GFF6085	0.55	-0.3
147,463	-		GFF6085	0.55	+0.2
147,463	-		GFF6085	0.55	-0.1
147,463	-		GFF6085	0.55	-1.4
147,463	-		GFF6085	0.55	-0.2
147,474	+		GFF6085	0.57	-0.4
147,475	-		GFF6085	0.57	-0.7
147,475	-		GFF6085	0.57	-0.1
147,475	-		GFF6085	0.57	-0.6
147,475	-		GFF6085	0.57	-0.6
147,475	-		GFF6085	0.57	+0.5
147,475	-		GFF6085	0.57	-0.2
147,475	-		GFF6085	0.57	-1.4
147,588	+		GFF6085	0.76	+2.8
147,588	+		GFF6085	0.76	-3.0
147,588	+		GFF6085	0.76	-0.4
147,588	+		GFF6085	0.76	-2.4
147,589	-		GFF6085	0.76	+0.2
147,589	-		GFF6085	0.76	-2.9
147,589	-		GFF6085	0.76	-1.5
147,589	-		GFF6085	0.76	-0.8
147,750	+				-2.5
147,750	+				-0.8
147,750	+				+2.4
147,838	+				-1.8
147,839	-				+0.9
147,839	-				-1.5
147,839	-				-0.3
147,839	-				-0.4
147,923	+		GFF6086	0.13	+0.1
147,923	+		GFF6086	0.13	+0.7
147,924	-		GFF6086	0.13	+0.4
147,924	-		GFF6086	0.13	+0.7
147,924	-		GFF6086	0.13	+0.5
147,924	-		GFF6086	0.13	-3.0
148,020	-		GFF6086	0.25	+1.8