Strain Fitness in Variovorax sp. SCN45 around GFF4319

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
239,459	-		GFF4318	0.19	+0.5
239,459	-		GFF4318	0.19	+0.9
239,579	+		GFF4318	0.29	-0.0
239,593	+		GFF4318	0.30	-1.0
239,779	+		GFF4318	0.46	-1.7
239,779	+		GFF4318	0.46	-1.6
239,810	-		GFF4318	0.48	-1.5
239,977	+		GFF4318	0.62	-0.3
239,977	+		GFF4318	0.62	-1.3
240,001	+		GFF4318	0.64	+2.8
240,265	+		GFF4318	0.86	-3.8
240,266	-		GFF4318	0.86	+2.6
240,459	-				-1.1
240,747	-		GFF4319	0.38	+0.6
241,348	+				+0.1