Strain Fitness in Variovorax sp. SCN45 around GFF4227

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
137,833	+		GFF4226	0.11	-0.2
137,833	+		GFF4226	0.11	-1.7
137,833	+		GFF4226	0.11	+1.7
137,834	-		GFF4226	0.11	-2.0
137,848	+		GFF4226	0.12	+0.3
138,155	+		GFF4226	0.43	-2.6
138,155	+		GFF4226	0.43	-2.0
138,156	-		GFF4226	0.44	-0.5
138,156	-		GFF4226	0.44	+0.2
138,156	-		GFF4226	0.44	-0.6
138,283	+		GFF4226	0.56	-0.5
138,283	+		GFF4226	0.56	-1.3
138,284	-		GFF4226	0.56	-0.1
139,618	+		GFF4227	0.55	-2.9
139,618	+		GFF4227	0.55	-1.1
139,618	+		GFF4227	0.55	-1.5
139,619	-		GFF4227	0.55	-1.4
139,619	-		GFF4227	0.55	-0.7
140,122	+		GFF4227	0.85	+0.8
140,405	-				-1.6
140,405	-				+0.6
140,407	+				-0.2
140,407	+				-1.0
140,516	-		GFF4228	0.21	-1.1
140,545	+		GFF4228	0.26	-2.4
140,854	+		GFF4228	0.76	-1.3
140,855	-		GFF4228	0.76	+0.0
140,855	-		GFF4228	0.76	+0.1
140,864	-		GFF4228	0.77	-0.9
140,908	+		GFF4228	0.85	-1.7
140,909	-		GFF4228	0.85	+0.7
141,002	-				-0.4
141,184	+		GFF4229	0.29	-1.3
141,185	-		GFF4229	0.29	+0.5
141,278	-		GFF4229	0.43	-0.7
141,278	-		GFF4229	0.43	-0.7
141,278	-		GFF4229	0.43	+0.5
141,328	+		GFF4229	0.51	-1.5