Strain Fitness in Variovorax sp. SCN45 around GFF2062

Experiment: Community=Locust bean gum; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=4
109,614	+		GFF2061	0.86	+1.4
109,755	+				-3.2
109,755	+				-1.5
109,755	+				-2.7
109,756	-				+0.8
109,801	+				+2.4
109,801	+				-1.6
109,801	+				-2.6
109,801	+				-2.9
109,802	-				+0.1
109,802	-				+0.3
109,802	-				+0.8
109,802	-				+0.8
109,802	-				+2.4
109,802	-				-0.3
109,843	+				-0.4
109,843	+				+0.8
109,843	+				-2.7
109,843	+				-2.2
109,843	+				-1.4
110,297	+				-1.7
110,297	+				+0.5
110,297	+				-2.2
110,297	+				-2.5
110,297	+				-0.6
110,297	+				-0.3
110,297	+				+0.4
110,297	+				-0.7
110,297	+				+0.4
110,298	-				+3.4
110,298	-				-1.8
110,298	-				+1.8
110,472	+		GFF2063	0.12	-1.0
110,472	+		GFF2063	0.12	-2.4
110,472	+		GFF2063	0.12	-3.1
110,472	+		GFF2063	0.12	+1.1
110,746	+		GFF2063	0.31	-0.6
110,746	+		GFF2063	0.31	-2.0
110,746	+		GFF2063	0.31	-1.0
110,746	+		GFF2063	0.31	-0.1
110,746	+		GFF2063	0.31	+1.8
110,746	+		GFF2063	0.31	-0.6
110,746	+		GFF2063	0.31	-3.5
110,746	+		GFF2063	0.31	+0.2
110,747	-		GFF2063	0.32	-1.2
110,747	-		GFF2063	0.32	-1.0
110,747	-		GFF2063	0.32	-2.4
110,747	-		GFF2063	0.32	-3.2
110,790	+		GFF2063	0.35	-2.3
110,790	+		GFF2063	0.35	-1.4
110,790	+		GFF2063	0.35	+1.0
110,790	+		GFF2063	0.35	-0.6
110,790	+		GFF2063	0.35	+0.1
110,790	+		GFF2063	0.35	-0.1
110,791	-		GFF2063	0.35	+0.8
110,791	-		GFF2063	0.35	-2.2
110,791	-		GFF2063	0.35	-4.1
110,791	-		GFF2063	0.35	-3.2
110,791	-		GFF2063	0.35	+0.8
110,791	-		GFF2063	0.35	+0.8
110,791	-		GFF2063	0.35	-1.8
110,791	-		GFF2063	0.35	+0.0
110,791	-		GFF2063	0.35	+0.6
110,862	+		GFF2063	0.40	+1.3
110,862	+		GFF2063	0.40	-1.5
110,862	+		GFF2063	0.40	-0.7
110,862	+		GFF2063	0.40	-0.6
110,862	+		GFF2063	0.40	+0.8
110,862	+		GFF2063	0.40	-1.9
110,862	+		GFF2063	0.40	-1.3
110,862	+		GFF2063	0.40	+0.4
110,862	+		GFF2063	0.40	+0.8
110,862	+		GFF2063	0.40	-0.8
110,862	+		GFF2063	0.40	-0.4
110,862	+		GFF2063	0.40	-0.2
110,862	+		GFF2063	0.40	+1.0
110,862	+		GFF2063	0.40	+1.7
110,862	+		GFF2063	0.40	-1.8
110,862	+		GFF2063	0.40	+0.1
110,862	+		GFF2063	0.40	+0.8
110,862	+		GFF2063	0.40	+1.0
110,863	-		GFF2063	0.40	+0.4
110,863	-		GFF2063	0.40	-1.8
110,863	-		GFF2063	0.40	-1.4
110,863	-		GFF2063	0.40	+0.7
110,863	-		GFF2063	0.40	-2.6
110,863	-		GFF2063	0.40	-2.5
110,863	-		GFF2063	0.40	-2.0
110,863	-		GFF2063	0.40	+0.2
110,863	-		GFF2063	0.40	+3.4
110,863	-		GFF2063	0.40	+1.2
110,863	-		GFF2063	0.40	+1.2
110,863	-		GFF2063	0.40	+0.4
110,863	-		GFF2063	0.40	-1.7
110,863	-		GFF2063	0.40	+2.3
110,863	-		GFF2063	0.40	-0.4
110,863	-		GFF2063	0.40	+0.3
110,863	-		GFF2063	0.40	+3.2
110,863	-		GFF2063	0.40	-1.0
110,863	-		GFF2063	0.40	-2.0
110,863	-		GFF2063	0.40	-0.7
110,863	-		GFF2063	0.40	+1.1
110,863	-		GFF2063	0.40	-2.5
110,863	-		GFF2063	0.40	+1.9
110,863	-		GFF2063	0.40	-1.2
110,863	-		GFF2063	0.40	-1.2
110,942	+		GFF2063	0.45	-0.4
110,942	+		GFF2063	0.45	-0.6
110,942	+		GFF2063	0.45	+1.4
110,942	+		GFF2063	0.45	-1.9
110,942	+		GFF2063	0.45	+1.1
110,942	+		GFF2063	0.45	+1.0
110,942	+		GFF2063	0.45	-1.9
110,942	+		GFF2063	0.45	-0.4
110,943	-		GFF2063	0.45	-0.1
110,943	-		GFF2063	0.45	-1.1
110,943	-		GFF2063	0.45	+0.4
111,027	+		GFF2063	0.51	-2.1
111,027	+		GFF2063	0.51	-1.4
111,028	-		GFF2063	0.51	-1.7
111,186	+		GFF2063	0.62	+0.8
111,187	-		GFF2063	0.62	+1.4
111,187	-		GFF2063	0.62	+1.0
111,187	-		GFF2063	0.62	-0.8