Strain Fitness in Variovorax sp. SCN45 around GFF7282

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
52	+		GFF7282	0.40	-2.5
52	+		GFF7282	0.40	-4.2
52	+		GFF7282	0.40	+0.6
52	+		GFF7282	0.40	-0.4
52	+		GFF7282	0.40	+0.2
88	-		GFF7282	0.69	-1.6
105	+		GFF7282	0.83	-1.8
106	-		GFF7282	0.83	+0.3
124	+				-1.8
124	+				+0.3
124	+				-1.6
124	+				-0.3
124	+				-2.3
125	-				-4.0
125	-				-1.2
125	-				+0.4
254	-				-0.6
276	+				+0.5
276	+				-0.0
277	-				-0.3
334	+				+1.1
334	+				-2.6
334	+				-0.5
335	-				-0.5
335	-				+1.4
352	+				-3.3
352	+				+1.2
353	-				-2.9
353	-				-1.0
353	-				+1.0
419	-		GFF7283	0.11	-3.3
419	-		GFF7283	0.11	+1.2
547	+		GFF7283	0.19	-1.8
547	+		GFF7283	0.19	+0.3
548	-		GFF7283	0.19	+0.4
721	+		GFF7283	0.29	+0.7
721	+		GFF7283	0.29	-0.2
721	+		GFF7283	0.29	+2.2
721	+		GFF7283	0.29	-1.5
721	+		GFF7283	0.29	+0.2
721	+		GFF7283	0.29	+0.2
721	+		GFF7283	0.29	+0.6
722	-		GFF7283	0.30	+0.6
722	-		GFF7283	0.30	+0.8
722	-		GFF7283	0.30	-1.7
722	-		GFF7283	0.30	+1.7
862	+		GFF7283	0.38	+0.7
862	+		GFF7283	0.38	+1.4
862	+		GFF7283	0.38	+2.2
862	+		GFF7283	0.38	-0.3
862	+		GFF7283	0.38	-0.6
862	+		GFF7283	0.38	-1.0
862	+		GFF7283	0.38	-0.8
863	-		GFF7283	0.38	-0.5
863	-		GFF7283	0.38	-1.4
1,015	+		GFF7283	0.47	-1.5
1,015	+		GFF7283	0.47	+1.2
1,015	+		GFF7283	0.47	-1.5
1,016	-		GFF7283	0.47	+0.6
1,016	-		GFF7283	0.47	-0.8