Strain Fitness in Variovorax sp. SCN45 around GFF6374

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
42,654	-		GFF6373	0.25	-0.0
42,950	-		GFF6373	0.52	-2.3
43,046	+		GFF6373	0.61	+1.6
43,443	+				-1.5
43,444	-				-0.5
43,444	-				+0.7
43,493	-				+1.1
43,551	+				+1.2
43,551	+				+0.7
43,552	-				+0.3
43,552	-				+1.1
43,575	+				+0.7
43,575	+				+0.3
43,677	+				-1.2
43,677	+				-0.1
44,376	+		GFF6374	0.64	-3.2
44,825	+				+0.6
44,825	+				+2.3
44,825	+				-0.3
44,826	-				-1.4
45,311	-		GFF6375	0.12	+0.2
45,428	-		GFF6375	0.15	-1.3
45,598	+		GFF6375	0.19	+0.9
45,761	-		GFF6375	0.24	-0.2
45,767	-		GFF6375	0.24	-3.1