Experiment: Community=guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF981 and GFF982 are separated by 4 nucleotides GFF982 and GFF983 overlap by 4 nucleotides GFF983 and GFF984 are separated by 40 nucleotides
GFF981 - Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4), at 299,282 to 300,712
GFF981
GFF982 - Cell division protein ZapE, at 300,717 to 301,817
GFF982
GFF983 - hypothetical protein, at 301,814 to 302,497
GFF983
GFF984 - Protein phosphatase 2C-like, at 302,538 to 303,230
GFF984
Position (kb) 300
301
302 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.739 kb on - strand at 300.739 kb on - strand at 300.739 kb on - strand at 300.739 kb on - strand at 300.834 kb on + strand, within GFF982 at 300.834 kb on + strand, within GFF982 at 300.834 kb on + strand, within GFF982 at 300.834 kb on + strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.900 kb on + strand, within GFF982 at 300.900 kb on + strand, within GFF982 at 300.900 kb on + strand, within GFF982 at 300.900 kb on + strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 301.086 kb on + strand, within GFF982 at 301.086 kb on + strand, within GFF982 at 301.086 kb on + strand, within GFF982 at 301.087 kb on - strand, within GFF982 at 301.087 kb on - strand, within GFF982 at 301.087 kb on - strand, within GFF982 at 301.222 kb on - strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.440 kb on - strand, within GFF982 at 301.440 kb on - strand, within GFF982 at 301.536 kb on + strand, within GFF982 at 301.537 kb on - strand, within GFF982 at 301.647 kb on + strand, within GFF982 at 301.648 kb on - strand, within GFF982 at 301.648 kb on - strand, within GFF982 at 301.648 kb on - strand, within GFF982 at 301.648 kb on - strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 302.020 kb on + strand, within GFF983 at 302.326 kb on + strand, within GFF983 at 302.506 kb on + strand at 302.506 kb on + strand at 302.507 kb on - strand at 302.582 kb on - strand at 302.662 kb on + strand, within GFF984 at 302.662 kb on + strand, within GFF984 at 302.662 kb on + strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.696 kb on - strand, within GFF984 at 302.696 kb on - strand, within GFF984 at 302.696 kb on - strand, within GFF984 at 302.696 kb on - strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984
Per-strain Table
Position Strand Gene LocusTag Fraction Community=guar; Passage=4 remove 300,738 + +0.5 300,738 + +1.9 300,738 + -2.1 300,738 + -0.1 300,738 + -2.3 300,738 + -2.1 300,738 + +0.3 300,738 + -3.3 300,738 + -1.3 300,738 + -0.9 300,739 - -4.0 300,739 - -1.6 300,739 - -2.2 300,739 - +1.9 300,834 + GFF982 0.11 -0.9 300,834 + GFF982 0.11 -0.1 300,834 + GFF982 0.11 -2.4 300,834 + GFF982 0.11 -1.4 300,835 - GFF982 0.11 -1.1 300,835 - GFF982 0.11 -2.4 300,835 - GFF982 0.11 -0.4 300,835 - GFF982 0.11 -2.2 300,835 - GFF982 0.11 -2.5 300,835 - GFF982 0.11 -0.4 300,835 - GFF982 0.11 -1.6 300,835 - GFF982 0.11 -2.5 300,900 + GFF982 0.17 +0.1 300,900 + GFF982 0.17 -2.7 300,900 + GFF982 0.17 +0.9 300,900 + GFF982 0.17 -2.5 300,901 - GFF982 0.17 -0.9 300,901 - GFF982 0.17 -1.9 300,901 - GFF982 0.17 -1.3 300,901 - GFF982 0.17 +0.9 300,901 - GFF982 0.17 -2.6 300,901 - GFF982 0.17 -2.9 300,901 - GFF982 0.17 -1.4 300,901 - GFF982 0.17 +0.1 300,906 + GFF982 0.17 -0.1 300,906 + GFF982 0.17 -1.1 300,906 + GFF982 0.17 -2.7 300,906 + GFF982 0.17 -0.4 300,906 + GFF982 0.17 -1.4 300,906 + GFF982 0.17 -0.8 300,906 + GFF982 0.17 -1.4 300,906 + GFF982 0.17 -0.1 300,906 + GFF982 0.17 +0.1 300,906 + GFF982 0.17 -1.7 300,906 + GFF982 0.17 -0.9 300,906 + GFF982 0.17 -2.3 300,906 + GFF982 0.17 -4.1 300,906 + GFF982 0.17 -0.7 300,906 + GFF982 0.17 -0.7 300,906 + GFF982 0.17 -0.7 300,906 + GFF982 0.17 -2.1 300,906 + GFF982 0.17 -1.4 300,906 + GFF982 0.17 -3.5 300,906 + GFF982 0.17 -0.7 300,907 - GFF982 0.17 -4.0 300,907 - GFF982 0.17 -1.4 300,907 - GFF982 0.17 -1.9 300,907 - GFF982 0.17 -1.9 300,907 - GFF982 0.17 -2.0 300,907 - GFF982 0.17 -3.1 300,907 - GFF982 0.17 -1.3 300,907 - GFF982 0.17 -2.3 300,907 - GFF982 0.17 -2.0 300,907 - GFF982 0.17 -3.1 300,907 - GFF982 0.17 -1.1 300,907 - GFF982 0.17 -2.8 300,907 - GFF982 0.17 -1.8 300,907 - GFF982 0.17 -0.4 300,907 - GFF982 0.17 -2.6 300,907 - GFF982 0.17 -1.4 300,907 - GFF982 0.17 -1.8 300,907 - GFF982 0.17 -2.3 300,907 - GFF982 0.17 -3.3 300,907 - GFF982 0.17 -2.0 300,907 - GFF982 0.17 -0.4 300,907 - GFF982 0.17 -1.3 300,907 - GFF982 0.17 -1.3 300,907 - GFF982 0.17 -0.9 300,907 - GFF982 0.17 -0.5 300,907 - GFF982 0.17 -2.0 300,907 - GFF982 0.17 -1.3 300,907 - GFF982 0.17 -2.6 300,907 - GFF982 0.17 -1.0 300,907 - GFF982 0.17 -1.7 300,907 - GFF982 0.17 +0.2 300,907 - GFF982 0.17 +0.6 300,907 - GFF982 0.17 -2.9 300,907 - GFF982 0.17 -0.7 300,907 - GFF982 0.17 -2.1 301,086 + GFF982 0.34 +0.3 301,086 + GFF982 0.34 +0.9 301,086 + GFF982 0.34 -3.3 301,087 - GFF982 0.34 +1.0 301,087 - GFF982 0.34 -0.1 301,087 - GFF982 0.34 -2.4 301,222 - GFF982 0.46 -1.6 301,347 + GFF982 0.57 -0.9 301,347 + GFF982 0.57 -0.9 301,347 + GFF982 0.57 -1.6 301,347 + GFF982 0.57 -2.9 301,347 + GFF982 0.57 -1.1 301,347 + GFF982 0.57 -3.2 301,347 + GFF982 0.57 -1.8 301,347 + GFF982 0.57 -1.7 301,347 + GFF982 0.57 -1.6 301,347 + GFF982 0.57 +0.9 301,347 + GFF982 0.57 -2.8 301,347 + GFF982 0.57 -2.9 301,347 + GFF982 0.57 -0.4 301,347 + GFF982 0.57 -2.0 301,347 + GFF982 0.57 -1.1 301,347 + GFF982 0.57 -1.1 301,347 + GFF982 0.57 -4.4 301,347 + GFF982 0.57 -0.5 301,347 + GFF982 0.57 -2.3 301,347 + GFF982 0.57 -1.6 301,348 - GFF982 0.57 +0.3 301,348 - GFF982 0.57 -1.1 301,348 - GFF982 0.57 -0.7 301,348 - GFF982 0.57 -1.6 301,348 - GFF982 0.57 +1.1 301,348 - GFF982 0.57 -1.4 301,348 - GFF982 0.57 -0.1 301,348 - GFF982 0.57 -1.2 301,348 - GFF982 0.57 -0.4 301,348 - GFF982 0.57 -1.9 301,348 - GFF982 0.57 -3.6 301,348 - GFF982 0.57 -1.3 301,348 - GFF982 0.57 -1.9 301,348 - GFF982 0.57 -4.3 301,348 - GFF982 0.57 -0.7 301,348 - GFF982 0.57 -3.3 301,348 - GFF982 0.57 -1.3 301,348 - GFF982 0.57 -2.6 301,348 - GFF982 0.57 -0.9 301,348 - GFF982 0.57 -2.0 301,348 - GFF982 0.57 -1.7 301,440 - GFF982 0.66 -1.3 301,440 - GFF982 0.66 -3.6 301,536 + GFF982 0.74 -1.8 301,537 - GFF982 0.74 -1.8 301,647 + GFF982 0.84 -1.1 301,648 - GFF982 0.85 -0.7 301,648 - GFF982 0.85 -0.1 301,648 - GFF982 0.85 -2.1 301,648 - GFF982 0.85 -0.1 301,701 + GFF982 0.89 -0.9 301,701 + GFF982 0.89 -1.4 301,701 + GFF982 0.89 -2.5 301,701 + GFF982 0.89 -1.1 301,701 + GFF982 0.89 -1.8 301,701 + GFF982 0.89 -1.9 301,701 - GFF982 0.89 -1.3 301,702 - GFF982 0.89 +0.9 301,702 - GFF982 0.89 +2.5 301,702 - GFF982 0.89 -3.8 301,702 - GFF982 0.89 -1.1 301,702 - GFF982 0.89 +0.1 301,702 - GFF982 0.89 -2.6 301,702 - GFF982 0.89 -2.4 301,979 + GFF983 0.24 +0.5 301,979 + GFF983 0.24 -1.9 301,979 + GFF983 0.24 -1.9 301,979 + GFF983 0.24 +2.9 301,979 + GFF983 0.24 -2.9 301,979 + GFF983 0.24 -0.4 301,979 + GFF983 0.24 -0.2 301,979 + GFF983 0.24 -1.3 301,980 - GFF983 0.24 +0.6 301,980 - GFF983 0.24 -1.0 301,980 - GFF983 0.24 +0.3 301,980 - GFF983 0.24 +0.7 301,980 - GFF983 0.24 -0.9 301,980 - GFF983 0.24 +0.0 301,980 - GFF983 0.24 -0.7 302,020 + GFF983 0.30 -1.1 302,326 + GFF983 0.75 +0.9 302,506 + -0.6 302,506 + -0.6 302,507 - +1.9 302,582 - -0.7 302,662 + GFF984 0.18 -1.9 302,662 + GFF984 0.18 -0.1 302,662 + GFF984 0.18 -1.3 302,663 - GFF984 0.18 -0.5 302,663 - GFF984 0.18 +1.5 302,663 - GFF984 0.18 +0.7 302,663 - GFF984 0.18 -0.7 302,663 - GFF984 0.18 -0.4 302,663 - GFF984 0.18 +2.0 302,695 + GFF984 0.23 +1.6 302,695 + GFF984 0.23 +1.5 302,695 + GFF984 0.23 +0.1 302,695 + GFF984 0.23 -2.0 302,695 + GFF984 0.23 -0.2 302,695 + GFF984 0.23 +0.5 302,695 + GFF984 0.23 +0.8 302,695 + GFF984 0.23 +1.4 302,696 - GFF984 0.23 +1.3 302,696 - GFF984 0.23 -0.5 302,696 - GFF984 0.23 -1.0 302,696 - GFF984 0.23 -2.9 302,755 + GFF984 0.31 +1.3 302,755 + GFF984 0.31 -1.3 302,755 + GFF984 0.31 -0.8 302,755 + GFF984 0.31 -0.9 302,755 + GFF984 0.31 -0.3 302,755 + GFF984 0.31 +1.0 302,755 + GFF984 0.31 -1.2 302,755 + GFF984 0.31 -1.0 302,755 + GFF984 0.31 +0.4 302,755 + GFF984 0.31 +1.3 302,755 + GFF984 0.31 +0.3 302,755 + GFF984 0.31 +0.5 302,755 + GFF984 0.31 -1.2 302,755 + GFF984 0.31 +0.4 302,755 + GFF984 0.31 +1.2 302,755 + GFF984 0.31 -2.2 302,755 + GFF984 0.31 +0.9 302,755 + GFF984 0.31 +0.2 302,755 + GFF984 0.31 -3.5 302,756 - GFF984 0.31 -2.0 302,756 - GFF984 0.31 +2.1 302,756 - GFF984 0.31 -2.8 302,756 - GFF984 0.31 -0.7 302,756 - GFF984 0.31 -1.5 302,756 - GFF984 0.31 -0.9 302,756 - GFF984 0.31 -1.1 302,756 - GFF984 0.31 -0.5 302,756 - GFF984 0.31 +2.6 302,756 - GFF984 0.31 -0.3 302,756 - GFF984 0.31 +1.3 302,756 - GFF984 0.31 -1.8 302,756 - GFF984 0.31 -0.3 302,756 - GFF984 0.31 +1.5
Or see this region's nucleotide sequence