Strain Fitness in Variovorax sp. SCN45 around GFF7005

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
20,751	+		GFF7004	0.55	+0.7
21,009	+		GFF7004	0.68	+0.3
21,010	-		GFF7004	0.68	+0.6
21,150	+		GFF7004	0.74	+1.6
21,151	-		GFF7004	0.74	+0.6
21,321	+		GFF7004	0.82	-2.2
21,366	+		GFF7004	0.84	+0.1
21,367	-		GFF7004	0.84	+2.3
21,367	-		GFF7004	0.84	+1.2
21,528	+				-1.0
21,528	+				+0.3
21,528	+				-1.2
21,529	-				-2.4
21,529	-				-0.0
21,542	+				-0.7
21,620	+				-0.8
21,950	+		GFF7005	0.24	+0.5
22,072	-		GFF7005	0.35	+1.1
22,158	-		GFF7005	0.43	-0.3
22,158	-		GFF7005	0.43	-0.4
22,244	+		GFF7005	0.51	+0.3
22,274	+		GFF7005	0.53	-1.3
22,275	-		GFF7005	0.53	-1.0
22,275	-		GFF7005	0.53	+1.0
22,275	-		GFF7005	0.53	-1.4
22,597	+		GFF7005	0.83	+0.4
22,849	+				-0.0
23,126	-		GFF7006	0.48	-1.0
23,126	-		GFF7006	0.48	-0.1
23,126	-		GFF7006	0.48	-2.2
23,188	+		GFF7006	0.56	-2.0
23,188	+		GFF7006	0.56	+1.8
23,189	-		GFF7006	0.56	-0.6
23,204	+		GFF7006	0.58	+1.3
23,205	-		GFF7006	0.59	+1.3
23,205	-		GFF7006	0.59	-0.7
23,316	+		GFF7006	0.74	-0.5
23,316	+		GFF7006	0.74	-0.5
23,317	-		GFF7006	0.74	-0.0
23,317	-		GFF7006	0.74	+0.7
23,482	+				+1.3
23,483	-				+0.2
23,541	+				+0.7
23,541	+				+0.7
23,542	-				-0.0
23,542	-				-0.2
23,542	-				-1.2
23,542	-				-1.4