Experiment: Community=guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6625 and GFF6626 are separated by 285 nucleotides GFF6626 and GFF6627 are separated by 572 nucleotides GFF6627 and GFF6628 are separated by 62 nucleotides
GFF6625 - probable 1,4-butanediol diacrylate esterase, at 70,422 to 71,660
GFF6625
GFF6626 - ISPsy6, transposase, at 71,946 to 73,394
GFF6626
GFF6627 - Mobile element protein, at 73,967 to 74,260
GFF6627
GFF6628 - Mobile element protein, at 74,323 to 74,490
GFF6628
Position (kb) 71
72
73
74 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 70.982 kb on + strand, within GFF6625 at 70.983 kb on - strand, within GFF6625 at 71.205 kb on + strand, within GFF6625 at 71.206 kb on - strand, within GFF6625 at 71.513 kb on + strand, within GFF6625 at 71.520 kb on + strand, within GFF6625 at 71.520 kb on + strand, within GFF6625 at 71.520 kb on + strand, within GFF6625 at 71.520 kb on + strand, within GFF6625 at 71.521 kb on - strand, within GFF6625 at 71.521 kb on - strand, within GFF6625 at 71.521 kb on - strand, within GFF6625 at 71.521 kb on - strand, within GFF6625 at 71.523 kb on + strand, within GFF6625 at 71.524 kb on - strand, within GFF6625 at 71.524 kb on - strand, within GFF6625 at 71.524 kb on - strand, within GFF6625 at 71.631 kb on + strand at 71.631 kb on + strand at 71.631 kb on + strand at 71.632 kb on - strand at 71.632 kb on - strand at 71.632 kb on - strand at 72.012 kb on + strand at 72.012 kb on + strand at 72.012 kb on + strand at 72.012 kb on + strand at 72.013 kb on - strand at 72.013 kb on - strand at 72.013 kb on - strand at 72.014 kb on + strand at 72.014 kb on + strand at 72.014 kb on + strand at 72.014 kb on + strand at 72.014 kb on + strand at 72.015 kb on - strand at 72.015 kb on - strand at 72.015 kb on - strand at 72.123 kb on + strand, within GFF6626 at 72.123 kb on + strand, within GFF6626 at 72.124 kb on - strand, within GFF6626 at 72.150 kb on + strand, within GFF6626 at 72.150 kb on + strand, within GFF6626 at 72.150 kb on + strand, within GFF6626 at 72.150 kb on + strand, within GFF6626 at 72.150 kb on + strand, within GFF6626 at 72.150 kb on + strand, within GFF6626 at 72.150 kb on + strand, within GFF6626 at 72.150 kb on + strand, within GFF6626 at 72.150 kb on + strand, within GFF6626 at 72.151 kb on - strand, within GFF6626 at 72.151 kb on - strand, within GFF6626 at 72.151 kb on - strand, within GFF6626 at 72.156 kb on + strand, within GFF6626 at 72.156 kb on + strand, within GFF6626 at 72.156 kb on + strand, within GFF6626 at 72.156 kb on + strand, within GFF6626 at 72.156 kb on + strand, within GFF6626 at 72.156 kb on + strand, within GFF6626 at 72.156 kb on + strand, within GFF6626 at 72.156 kb on + strand, within GFF6626 at 72.156 kb on + strand, within GFF6626 at 72.157 kb on - strand, within GFF6626 at 72.157 kb on - strand, within GFF6626 at 72.157 kb on - strand, within GFF6626 at 72.157 kb on - strand, within GFF6626 at 72.157 kb on - strand, within GFF6626 at 72.157 kb on - strand, within GFF6626 at 72.157 kb on - strand, within GFF6626 at 72.157 kb on - strand, within GFF6626 at 72.157 kb on - strand, within GFF6626 at 72.157 kb on - strand, within GFF6626 at 72.163 kb on - strand, within GFF6626 at 72.298 kb on + strand, within GFF6626 at 72.298 kb on + strand, within GFF6626 at 72.298 kb on + strand, within GFF6626 at 72.298 kb on + strand, within GFF6626 at 72.298 kb on + strand, within GFF6626 at 72.299 kb on - strand, within GFF6626 at 72.471 kb on + strand, within GFF6626 at 72.471 kb on + strand, within GFF6626 at 72.685 kb on + strand, within GFF6626 at 72.690 kb on + strand, within GFF6626 at 72.690 kb on + strand, within GFF6626 at 72.690 kb on + strand, within GFF6626 at 72.690 kb on + strand, within GFF6626 at 72.691 kb on - strand, within GFF6626 at 72.846 kb on + strand, within GFF6626 at 72.897 kb on + strand, within GFF6626 at 72.897 kb on + strand, within GFF6626 at 72.897 kb on + strand, within GFF6626 at 72.898 kb on - strand, within GFF6626 at 72.898 kb on - strand, within GFF6626 at 72.963 kb on + strand, within GFF6626 at 72.963 kb on + strand, within GFF6626 at 72.963 kb on + strand, within GFF6626 at 72.964 kb on - strand, within GFF6626 at 72.964 kb on - strand, within GFF6626 at 72.964 kb on - strand, within GFF6626 at 72.984 kb on + strand, within GFF6626 at 73.059 kb on + strand, within GFF6626 at 73.060 kb on - strand, within GFF6626 at 73.124 kb on + strand, within GFF6626 at 73.124 kb on + strand, within GFF6626 at 73.242 kb on + strand, within GFF6626 at 73.320 kb on + strand at 73.320 kb on + strand at 73.321 kb on - strand at 73.352 kb on + strand at 73.352 kb on + strand at 73.353 kb on - strand at 73.353 kb on - strand at 73.354 kb on + strand at 73.354 kb on + strand at 73.354 kb on + strand at 73.355 kb on - strand at 73.576 kb on - strand at 73.576 kb on - strand at 73.628 kb on + strand at 73.628 kb on + strand at 73.628 kb on + strand at 73.629 kb on - strand at 73.629 kb on - strand at 73.641 kb on + strand at 73.641 kb on + strand at 73.641 kb on + strand at 73.641 kb on + strand at 73.642 kb on - strand at 73.642 kb on - strand at 73.642 kb on - strand at 73.642 kb on - strand at 73.642 kb on - strand at 73.642 kb on - strand at 73.736 kb on + strand at 73.736 kb on + strand at 73.737 kb on - strand at 73.737 kb on - strand at 73.737 kb on - strand at 73.772 kb on - strand at 73.854 kb on + strand at 73.855 kb on - strand at 73.855 kb on - strand at 73.913 kb on + strand at 73.913 kb on + strand at 73.913 kb on + strand at 73.914 kb on - strand at 73.914 kb on - strand at 73.914 kb on - strand at 73.958 kb on + strand at 74.109 kb on + strand, within GFF6627 at 74.109 kb on + strand, within GFF6627 at 74.109 kb on + strand, within GFF6627 at 74.110 kb on - strand, within GFF6627 at 74.110 kb on - strand, within GFF6627 at 74.110 kb on - strand, within GFF6627 at 74.110 kb on - strand, within GFF6627 at 74.124 kb on + strand, within GFF6627 at 74.125 kb on - strand, within GFF6627 at 74.125 kb on - strand, within GFF6627
Per-strain Table
Position Strand Gene LocusTag Fraction Community=guar; Passage=4 remove 70,982 + GFF6625 0.45 -0.1 70,983 - GFF6625 0.45 +0.7 71,205 + GFF6625 0.63 -0.2 71,206 - GFF6625 0.63 -1.2 71,513 + GFF6625 0.88 -1.1 71,520 + GFF6625 0.89 +0.6 71,520 + GFF6625 0.89 +2.0 71,520 + GFF6625 0.89 -2.5 71,520 + GFF6625 0.89 -1.1 71,521 - GFF6625 0.89 +0.5 71,521 - GFF6625 0.89 -1.3 71,521 - GFF6625 0.89 -1.5 71,521 - GFF6625 0.89 -0.4 71,523 + GFF6625 0.89 -0.5 71,524 - GFF6625 0.89 +0.6 71,524 - GFF6625 0.89 -0.2 71,524 - GFF6625 0.89 +0.1 71,631 + +2.3 71,631 + +0.3 71,631 + +0.9 71,632 - +1.3 71,632 - -0.4 71,632 - +0.7 72,012 + +0.9 72,012 + -1.0 72,012 + -1.6 72,012 + +0.2 72,013 - +1.3 72,013 - -0.7 72,013 - -1.8 72,014 + +1.1 72,014 + -1.8 72,014 + -3.0 72,014 + -0.9 72,014 + -0.7 72,015 - +1.1 72,015 - +1.5 72,015 - -0.9 72,123 + GFF6626 0.12 -0.1 72,123 + GFF6626 0.12 -0.3 72,124 - GFF6626 0.12 +2.1 72,150 + GFF6626 0.14 -1.0 72,150 + GFF6626 0.14 -0.1 72,150 + GFF6626 0.14 +1.0 72,150 + GFF6626 0.14 +0.9 72,150 + GFF6626 0.14 -0.7 72,150 + GFF6626 0.14 +0.5 72,150 + GFF6626 0.14 -1.9 72,150 + GFF6626 0.14 -0.4 72,150 + GFF6626 0.14 +1.3 72,151 - GFF6626 0.14 -0.5 72,151 - GFF6626 0.14 +1.5 72,151 - GFF6626 0.14 -2.4 72,156 + GFF6626 0.14 -0.2 72,156 + GFF6626 0.14 -0.9 72,156 + GFF6626 0.14 -1.5 72,156 + GFF6626 0.14 -0.4 72,156 + GFF6626 0.14 -0.2 72,156 + GFF6626 0.14 +1.1 72,156 + GFF6626 0.14 -0.8 72,156 + GFF6626 0.14 -0.2 72,156 + GFF6626 0.14 -1.1 72,157 - GFF6626 0.15 -1.1 72,157 - GFF6626 0.15 -1.9 72,157 - GFF6626 0.15 -0.5 72,157 - GFF6626 0.15 -1.0 72,157 - GFF6626 0.15 -0.7 72,157 - GFF6626 0.15 -0.5 72,157 - GFF6626 0.15 -1.3 72,157 - GFF6626 0.15 -0.2 72,157 - GFF6626 0.15 -0.8 72,157 - GFF6626 0.15 -0.6 72,163 - GFF6626 0.15 -2.6 72,298 + GFF6626 0.24 -0.1 72,298 + GFF6626 0.24 -1.7 72,298 + GFF6626 0.24 +0.9 72,298 + GFF6626 0.24 -2.5 72,298 + GFF6626 0.24 -3.2 72,299 - GFF6626 0.24 +0.7 72,471 + GFF6626 0.36 -0.8 72,471 + GFF6626 0.36 -0.1 72,685 + GFF6626 0.51 +2.2 72,690 + GFF6626 0.51 -1.0 72,690 + GFF6626 0.51 +1.0 72,690 + GFF6626 0.51 -0.7 72,690 + GFF6626 0.51 -1.5 72,691 - GFF6626 0.51 +1.2 72,846 + GFF6626 0.62 -1.4 72,897 + GFF6626 0.66 -0.7 72,897 + GFF6626 0.66 -2.3 72,897 + GFF6626 0.66 +0.7 72,898 - GFF6626 0.66 -2.9 72,898 - GFF6626 0.66 -2.2 72,963 + GFF6626 0.70 -1.8 72,963 + GFF6626 0.70 -0.8 72,963 + GFF6626 0.70 -1.1 72,964 - GFF6626 0.70 -0.5 72,964 - GFF6626 0.70 -2.3 72,964 - GFF6626 0.70 -1.6 72,984 + GFF6626 0.72 +1.0 73,059 + GFF6626 0.77 -1.0 73,060 - GFF6626 0.77 -1.9 73,124 + GFF6626 0.81 +0.7 73,124 + GFF6626 0.81 +1.5 73,242 + GFF6626 0.89 -1.1 73,320 + -0.1 73,320 + -2.8 73,321 - -1.9 73,352 + -0.6 73,352 + +0.3 73,353 - -2.3 73,353 - +1.2 73,354 + -2.0 73,354 + -0.7 73,354 + +0.5 73,355 - -0.8 73,576 - -0.2 73,576 - +0.2 73,628 + +0.5 73,628 + +0.3 73,628 + -2.2 73,629 - -2.7 73,629 - -1.6 73,641 + -1.0 73,641 + -0.4 73,641 + +0.1 73,641 + -1.9 73,642 - -0.7 73,642 - -0.3 73,642 - +0.5 73,642 - -0.1 73,642 - -0.4 73,642 - +1.7 73,736 + -1.3 73,736 + +0.7 73,737 - +1.2 73,737 - +1.9 73,737 - -1.1 73,772 - -0.7 73,854 + -0.2 73,855 - -0.2 73,855 - -0.9 73,913 + +0.2 73,913 + -0.2 73,913 + -1.7 73,914 - -1.5 73,914 - +1.3 73,914 - +1.8 73,958 + -0.1 74,109 + GFF6627 0.48 -0.1 74,109 + GFF6627 0.48 +1.9 74,109 + GFF6627 0.48 +0.2 74,110 - GFF6627 0.49 -0.1 74,110 - GFF6627 0.49 -0.4 74,110 - GFF6627 0.49 -1.1 74,110 - GFF6627 0.49 +0.3 74,124 + GFF6627 0.53 +1.6 74,125 - GFF6627 0.54 -1.7 74,125 - GFF6627 0.54 +0.8
Or see this region's nucleotide sequence